Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4074 |
Symbol | |
ID | 5831071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4532070 |
End bp | 4532972 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641369865 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001641515 |
Protein GI | 163853472 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTTC CGTTCGTCAA CGCCTCGGTG CAGGGCGATC TCAGCGCCCC GCCGGACCGA ATTTTCGGCC AGATCCCCGC CAGCGGCCTC GACGGCATCG CCTTCCTCGA TTTCGCCTAC GCGACGGCGG GTTTCAGCAC GCACCGGGTC GGTGGCCTTC TCGTCGGCAC GTGGCATGGC GGCTGGTACG GCCTGAGCCG GACCACGCTC ACCTTCAGCG ACGGCCCGAC CGGCAATGAG CCCTGCGACG AGCGCACCGG CGAGGCCTTC GTCCTGCGCG GGCCCGGCTA TGCCGGCCGC ACGCTCTGGA GCGGGCCATG CCGCGGGCGC TATCTCGCCT TCATGCCCGC CGCGGTGGAG CGGATGATCG AGGCGCCGCT CTCGCATCTC CGGATCGATT CGATCACCTG CGATCTCACC GAGCGGATGA CCGTCTCCCA TCTCCTGGCG GCCCTGGGGC AGGCGGCCAG CGGCCACGAC AGCGCCGCGG ACGCGCTTCT GGTCGACAGC GTGGCGCTCG CGGTGCTGCG CGCCTCCGGC GCCCTGTCGA GCCCACCCTC CCGTAAGAGC GCGGCGCTCA CCGCCCGGCA GGCGCGGCGG GTGCGCGACC TCGTCGCCGA GCGGATCGAT GCACCCCTGT CGCTCGGGGA GATGGCGGCG GTGGCGGGCC TCAGCGAGGG CTATTTCGTG CGCGCCTTCA AGGGCACCTT CGGCGTGACG CCCTATCAAT ATGTATTGCG CGAACGCGTG ACGCTGGCCC AGTCGCTGAT CCGCTCCGGC ACGGTCTCCT TGAGCGAGGC GGCCCTGCGC GCGGGCTTTC CCGATGCGCG GCGGATGGGG CGGACCTTCC GCAAGATGAT CGGGCGCTCG CCGACGGAAG CAACCCGGCT GCAGCGGGCC TGA
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Protein sequence | MSVPFVNASV QGDLSAPPDR IFGQIPASGL DGIAFLDFAY ATAGFSTHRV GGLLVGTWHG GWYGLSRTTL TFSDGPTGNE PCDERTGEAF VLRGPGYAGR TLWSGPCRGR YLAFMPAAVE RMIEAPLSHL RIDSITCDLT ERMTVSHLLA ALGQAASGHD SAADALLVDS VALAVLRASG ALSSPPSRKS AALTARQARR VRDLVAERID APLSLGEMAA VAGLSEGYFV RAFKGTFGVT PYQYVLRERV TLAQSLIRSG TVSLSEAALR AGFPDARRMG RTFRKMIGRS PTEATRLQRA
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