Gene Mext_4063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4063 
Symbol 
ID5833419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4518642 
End bp4519352 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content74% 
IMG OID641369854 
Productundecaprenyl pyrophosphate synthase 
Protein accessionYP_001641504 
Protein GI163853461 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCC CTCTCGATCG CAGATCAGGC CTCCACGCGG CGATCATCAT GGACGGCAAC 
GGCCGCTGGG CGAGCGCCCG CGGCCTGCCG CGGGGTGCGG GCCACCGGGC GGGCGTCAAG
ACGATCCAGC GGGTGGCGGA GGCAGCCCCC GCTCTCGGCA TCGGCACGCT GACGCTCTAC
GCCTTCTCCA GCGACAACTG GCGCCGCTCG GCCGAGGAGG TCGGCGGGCT GATGCGCCTG
TTGCGCGCCT ATCTGCGCGG CGAGACCGAT CGGCTCGCCC GCAGCGGCAC CCGCCTCACG
GTGATCGGCC GCCGCGACCG CCTGCCGCCC GGCATCCCGG AGGCGATCGA GCGGGCCGAG
GCCGCGACCG CGTCGGGCGA CCGGCTGCAT CTGCGCATCG CCGTCGATTA CTCCTCGCGC
GACGCGATCC TCGCCGCCGC CGCCCGGCTC GGGCCGGAGG GGCTCAGCCG TGAGGGCCTG
AGCAAGGCCC TGGGGGCGGA CGGAGATGTC GATCTCCTGA TCCGAACGGG GGGCGAGAAG
CGGCTCTCCG ACTTCCTCCT CTGGGAGGCG GCCTATGCGG AGCTGCATTT CACCGACCGG
ATGTGGCCCG ACTTCGGCGC CACCGACCTC GCCGCGGCGG TCGCCGACTT CACCGCCCGC
GACCGGCGGT TCGGCGGCCT GAACCCGCCC GCGGTGCCGC AAGCCGCCTG A
 
Protein sequence
MQSPLDRRSG LHAAIIMDGN GRWASARGLP RGAGHRAGVK TIQRVAEAAP ALGIGTLTLY 
AFSSDNWRRS AEEVGGLMRL LRAYLRGETD RLARSGTRLT VIGRRDRLPP GIPEAIERAE
AATASGDRLH LRIAVDYSSR DAILAAAARL GPEGLSREGL SKALGADGDV DLLIRTGGEK
RLSDFLLWEA AYAELHFTDR MWPDFGATDL AAAVADFTAR DRRFGGLNPP AVPQAA