| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4027 |
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| Symbol | |
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| ID | 5833629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4476489 |
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| End bp | 4478747 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641369818 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001641468 |
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| Protein GI | 163853425 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.749576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.189287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAAG GCGAGAGACA TATGTTCGAC GTACAACGTG AAGAGCTGAT CTGGGGCGAC
CGCAAGCTCG TCCTCGAGAC CGGCAAGACC GCCCGTCAGG CGGACGGCTC CGTGGTCGCC
ACCTACGGCG AGACCACCGT GCTCGCCACC GTGGTCGCGG GCAAGGAGCC CAAGGCCGGC
ATCGACTTCC TGCCGCTCAC CGTGAACTAC CAGGAGCGCG CCTACGCTGC CGGTCGCATC
CCCGGCGGCT ACTTCAAGCG CGAAGGCCGT CCCTCCGAGA AGGAGACGCT GGTCTCCCGC
CTGATCGACC GCCCGATCCG TCCGCTCTTC GTCGAGGGCT GGCGCAACGA CACCCAGGTC
GTCGTCACCG TCCTCTCCCA CGATCTCGAG AACGATCCCG ACATCGTCGC GATGGTCGCG
GCCTCCGCCG CCCTCACCCT CTCGGGCGTG CCCTTCATGG GCCCGATCGG CGCGGCTCGC
GTCGGCTACC TCAACGGCGG CTACAAGCTG AACCCGCTGG TGACGGAAAT CGCCGAATCG
ACCCTCGACC TCGTCGTCGC CGGCACCCAG GACGCGGTGC TGATGGTCGA GTCCGAGGCC
AAGGAACTCT CCGAGGACGT GATGCTCGGG GCCGTGATGT TCGGCCACAA GCACTTCCAG
CCGGTGATCG AGGCGATCAT CCGTCTGGCC GAGAAGGCCG CCAAGGAGCC GCGCGACTTC
ACCCCGCCGG AGAACGCCGA CGTCGAGGCC GCCGTTCTCG CGGTCGCCGA GACCGAGCTG
CGCGAGGCCT ACAAGAAGAC GGTCAAGCAG GAGCGCTACG CCGCTGTCGA CGCCGTGAAG
GCGAAGGTCG TGGCCGCGCT CTGCCCGGCC GAGGGCGAGC AGAAGTTCAG CCCTGAGAAG
GTCAAGGCGG CCTTCAAGGA GGCGCAGTCG AAGGTGGTCC GCTGGAACAT CCTCGACACC
GGCTCGCGCA TCGACGGCCG TGACGTGAAG ACGGTCCGCT CGATCGTCTC CGAGGTCGGC
GTGCTGCCCC GCGCCCACGG TTCGTCGCTG TTCACCCGCG GCGAGACCCA GGCGCTGGTC
GTGGCCACGC TCGGCACCGG CGAGGACGAG CAGTTCATCG ACGCGCTGGA GGGGACCTAC
AAGGAGCGCT TCCTGCTCCA CTACAACTTC CCTCCCTACT CCGTCGGCGA GACCGGCCGC
ATGGGTTCGC CCGGCCGCCG CGAGATCGGC CACGGCAAGC TCGCTTGGCG CGCGATCCGG
CCCGTTCTGC CGCCGGCCCA CGAGTTCCCG TACACGATCC GCGTGGTCTC CGAGATCACC
GAGTCGAACG GCTCCTCCTC GATGGCTAGC GTCTGCGGCG GCTCGCTGTC GCTGATGGAT
GCGGGCGTGC CCCTGCGCCG CCCGGTCGCC GGCATCGCCA TGGGCCTCAT CCTCGAAGGT
GAGCGCTTCG CCGTGCTGTC CGACATCCTC GGCGACGAGG ATCACCTCGG CGACATGGAC
TTCAAGGTGG CCGGCTCGGA GGAGGGCATC ACCTCCCTCC AGATGGACAT CAAGATCGCC
GGCATCACCG AGGAGATCAT GAAGATCGCC CTCGCCCAGG CCAAGGACGG CCGCGCCCAC
ATCCTGGGCG AGATGTCCAA GGCCCTGACC GCGGCCCGTC CGGAGCTCGG CGAGTACGCG
CCGCGCATCG AGACGATGCA GATCCCCACC GACAAGATCC GTGACGTGAT CGGCACCGGC
GGCAAGATCA TCCGCGAGAT CGTCGAGAAG ACCGGCGCCA AGATCAACAT CGAGGATACC
GGCATCGTCA AGATCGCCTC CTCGGACGGC AAGGCGATCA AGGCGGCCTA TAACTGGATC
CGCTCCATCG TCGCCGAGCC CGAGGCCGGC ACGATCTACG ACGGCACGAT CGTCAAGATC
ATGGAGTTCG GCGCCTTCGT GAACTTCTTC GGCGCCAAGG ACGGCCTCGT CCACATCTCG
GAGCTGGCCG CCCAGCGCGT CGCCAAGGTC GGCGACGTCG TGAAGGAGGG CCAGAAGGTC
AAGGTGAAGT TCCTCGGTGC CGACGAGCGC GGCAAGATCC GCCTCTCGAT GAAGGTCGTC
GATCAGGAGA CCGGTGAGGA CCTCACCGAG AAGCTGAAGG CCGAGCGGGC TGAGCGCGGC
GAGCCGGAGC GCGAGGAGCG CAGCGACCGC GGTGATCGTG GCGACCGTGG CCCCCGCCGC
GACCGCGGCG AGCGCCGCCG GGAATCGTCG GGCGAGTAA
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| Protein sequence | MFEGERHMFD VQREELIWGD RKLVLETGKT ARQADGSVVA TYGETTVLAT VVAGKEPKAG
IDFLPLTVNY QERAYAAGRI PGGYFKREGR PSEKETLVSR LIDRPIRPLF VEGWRNDTQV
VVTVLSHDLE NDPDIVAMVA ASAALTLSGV PFMGPIGAAR VGYLNGGYKL NPLVTEIAES
TLDLVVAGTQ DAVLMVESEA KELSEDVMLG AVMFGHKHFQ PVIEAIIRLA EKAAKEPRDF
TPPENADVEA AVLAVAETEL REAYKKTVKQ ERYAAVDAVK AKVVAALCPA EGEQKFSPEK
VKAAFKEAQS KVVRWNILDT GSRIDGRDVK TVRSIVSEVG VLPRAHGSSL FTRGETQALV
VATLGTGEDE QFIDALEGTY KERFLLHYNF PPYSVGETGR MGSPGRREIG HGKLAWRAIR
PVLPPAHEFP YTIRVVSEIT ESNGSSSMAS VCGGSLSLMD AGVPLRRPVA GIAMGLILEG
ERFAVLSDIL GDEDHLGDMD FKVAGSEEGI TSLQMDIKIA GITEEIMKIA LAQAKDGRAH
ILGEMSKALT AARPELGEYA PRIETMQIPT DKIRDVIGTG GKIIREIVEK TGAKINIEDT
GIVKIASSDG KAIKAAYNWI RSIVAEPEAG TIYDGTIVKI MEFGAFVNFF GAKDGLVHIS
ELAAQRVAKV GDVVKEGQKV KVKFLGADER GKIRLSMKVV DQETGEDLTE KLKAERAERG
EPEREERSDR GDRGDRGPRR DRGERRRESS GE
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