Gene Mext_4023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4023 
Symbol 
ID5832829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4472404 
End bp4472895 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content64% 
IMG OID641369814 
Producthelix-turn-helix HxlR type 
Protein accessionYP_001641464 
Protein GI163853421 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.259288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.513403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGACAAG GTGACAGCGA CGGAACCGCC CTCCGGCCGG GTCAAACCGA ACTGGCACGG 
AGATTTGCCG TCTGGCAGTC CAGTTTCGCG GAGATTTCGT CATGTCCGGT CCGCGATGTG
CTGGATCGGG TCGGTGACAA GTGGTCGATG CTGATCTTGA TCGCATTGGC CGCAGGGCCG
GGCCGGTTCA GCGCGGTTGC CCGCATGATC CCCGACATCT CCAAGCGTAT GCTGACGCAG
ACGTTTCGCG ACCTCGAACG GGATGGCCTC ATCGCACGGA CGGTGTTCCC GACGAAGCCG
CCGAGTGTCG AGTACCGGCT GACGCCGTTG GGAAGCGCGC TCCTTGATCC GCTCGCCCAC
CTCGTCGGCT GGGCCGAGCA GAACCATGCG GCCATTCAAG AGGCGCGGAA GCGTTTCGAG
GCCGGCTCTG TTCAAGACGG GAAACAGGAC GCGTTCGCGT CCCGGTCTTC GGCCGACGTC
TCGGCCGATT GA
 
Protein sequence
MGQGDSDGTA LRPGQTELAR RFAVWQSSFA EISSCPVRDV LDRVGDKWSM LILIALAAGP 
GRFSAVARMI PDISKRMLTQ TFRDLERDGL IARTVFPTKP PSVEYRLTPL GSALLDPLAH
LVGWAEQNHA AIQEARKRFE AGSVQDGKQD AFASRSSADV SAD