| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4022 |
|---|
| Symbol | |
|---|
| ID | 5832828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 4471433 |
|---|
| End bp | 4472326 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641369813 |
|---|
| Product | NmrA family protein |
|---|
| Protein accession | YP_001641463 |
|---|
| Protein GI | 163853420 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.144571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.731843 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAC CCGAACCGCG TCTTTTCGTG ACCGGTGCCA CCGGCCAGCT CGGCCGGCTG
GTGATCGAAG CCTTGCTGAA GCGGGTGCCG GCCGACAGCA TCGTGGCGGG TGTCCGCTCG
CTGGAGAGTG CTGCGGCTGA GGACCTGCGC GCGCAAGGCG TCACGCTCCG CATGGCCGAC
TACGCGCGTC CCGAGACATT GGTGGAAGCC TTTCGCAGCA TCGACCGCCT GCTGCTTATC
TCGTCCAGCG AGATCGGCCA GCGCGTTGCC CAGCACCAGA ACGTCATCCA AGCCGCCCGG
CAATCCGGCG TGAACCTGAT CGCCTATACC AGCCTGCTTC GCGCCGACAC CTCGCCACTC
GCCCTGGCAG ACGAGCATCG GCGGACGGAA GACGCGCTGA AGGCTTCCGG CTTGTCCTTC
GCCGTGCTGC GTAATGGCTG GTACACCGAG AACTACGCGG CCTCGATCGC GCCGGCCCTG
GCCCATGGGG TCCTTCTGGG CAGTGCGGGC GAGGGCCGGA TCGCCTCCGC CGCGCGGGCG
GACTTCGCCG AGGCCTCCGC CGTCGTGCTG ACGACAGACG GCCATGACGG ACGCGTCTAC
GAACTGGCGG GGGATGACGC CTACACCCTG GACGAGTTCG CGGCAGCGGT GAGCGTGCTG
TCCGGCCAGA CGGTCGTCTA CCGGAACCTA ACGGAGGCTG AGTTCAAGGC GGCCCTGGTC
GCCGCCGGCC TGCCGGAGGA CTTCGCGGCG CTGCTCGCCG ATTCGGATAT GGCGGCGGCC
CAGGGCGGAC TCAACGATAC GAACCGCCAG CTGAGCCGGC TGATCGGCCG GCCGACGACC
CCCTATCGGA CCACGATCGC CGGAACGATC AGCGGGATGG CGGCCCAGGA CTGA
|
|---|
| Protein sequence | MSTPEPRLFV TGATGQLGRL VIEALLKRVP ADSIVAGVRS LESAAAEDLR AQGVTLRMAD
YARPETLVEA FRSIDRLLLI SSSEIGQRVA QHQNVIQAAR QSGVNLIAYT SLLRADTSPL
ALADEHRRTE DALKASGLSF AVLRNGWYTE NYAASIAPAL AHGVLLGSAG EGRIASAARA
DFAEASAVVL TTDGHDGRVY ELAGDDAYTL DEFAAAVSVL SGQTVVYRNL TEAEFKAALV
AAGLPEDFAA LLADSDMAAA QGGLNDTNRQ LSRLIGRPTT PYRTTIAGTI SGMAAQD
|
|---|
| |