| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3995 |
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| Symbol | |
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| ID | 5835665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4435946 |
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| End bp | 4436512 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641369786 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001641437 |
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| Protein GI | 163853394 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0173651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.591095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCGCC TGTTCACCGG GCTCGAGATC CCGCCGGACA TCGCCGAGCG GCTGTCGTTC
TTCCGCGGCG GCCTGCCCGG CGCGCGCTGG ATCGAGCCGA GCGACTACCA CGTCACCCTG
CGCTTCCTCG GCGAGATCGA CGACATGATC GCCGCGGATG TCGATGCCGG CCTGCGGGAG
GCGCGGGTGC GCGCGCCGCT CACCGTGACG CTGGACGGGC TCGCGAGCTT CGGCGGCGAC
CGGCCGCGGG CGCTCTACGC CTCGGTCGTC CCCACGCCGG AACTCGTCGA ACTGCAGGAA
GAGCACGAGC GCATCGCCCG CCGGGCCGGG GCCGCGCCGG AGCGGCGCAA GTTCACGCCG
CATGTGACGC TGGCCCGCCT CAACCGCGAG GCCTCCCCGG AGGCCGTGGC GCGAAGGCTG
ACGGAGGCGG GGGTGTTTCC CCGCCTGACC TTCACGGCAC GCCGCGCCGC CCTGTTCTCC
GCCCGCACCT CGCGCGGCGG CGGGCCCTAC CTCGTCGAGG CGGCCTATCC CTTCGCGGAT
GCGGATTTCG AGCTGGACGA CGAATAG
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| Protein sequence | MPRLFTGLEI PPDIAERLSF FRGGLPGARW IEPSDYHVTL RFLGEIDDMI AADVDAGLRE
ARVRAPLTVT LDGLASFGGD RPRALYASVV PTPELVELQE EHERIARRAG AAPERRKFTP
HVTLARLNRE ASPEAVARRL TEAGVFPRLT FTARRAALFS ARTSRGGGPY LVEAAYPFAD
ADFELDDE
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