| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3984 |
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| Symbol | |
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| ID | 5835597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4427465 |
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| End bp | 4429024 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641369775 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001641426 |
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| Protein GI | 163853383 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.950119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCG CCGATCTTGG ACTGAGCGAC AAGGTACTCC AAGCCGTCAC CACGGCCGGC
TACACCGAGC CGACGCCGAT CCAGGCCCAG GCGATCCCGC ATGTGCTCGC CCGGCGCGAC
GTGCTCGGCA TCGCCCAGAC CGGCACCGGC AAGACCGCCG CCTTCACCCT GCCGATGCTG
ACCATGCTGG AGACCGGCCG CGCCCGGGCT CGCATGCCGC GCACGCTCAT CCTGGAGCCG
ACCCGCGAAC TCGCGGCGCA GGTCGAGGAG AATTTCGAGC GCTACGGCAC CAACCACAAG
CTCAACGTGG CGCTCATCAT CGGCGGCGTC TCCTTCGCCG ACCAGGATGC CAAGCTCACC
CGCGGCACCG ACGTGCTGAT CGCGACGCCC GGGCGCCTGC TAGACCATTT CGAGCGCGGC
AAGCTGCTGC TGACCGGCGT CGAGCTTCTC GTCATCGACG AGGCCGACCG GATGCTCGAC
ATGGGGTTCA TTCCCGACAT CGAGCGCATC GTGAAGATGG TGCCCTTCAC GCGCCAGACG
CTGTTCTTCT CCGCGACGAT GCCACCGGAG ATCGAGCGGC TGGCTGACAT GTTCCTGCAC
AACCCGCAGC GGGTCGAGGT GGCGCGTCCC GCCTCCACCG CCACGACCAT CGAGCAGCGC
CTCGTGGCGA CGGGCGCGGA GGGCCATGAG AAGCGCAAGG TGCTGCGCCA CCTCATCCGC
TCGGCGAGCG AGCTGCAGAA CGGCATCATC TTCTGCAACC GCAAGCGCGA CGTCGCCCAG
CTTCAGCGCT CGCTGACCAG CCACGGCTTC AACGCGGCAG CACTCCACGG CGACATGGAC
CAGCGCGCCC GCATGGCCGC CCTCGACGGC TTCCGCAGCG GCGAGGTTCC GCTGCTGGTG
GCCTCGGACG TCGCCGCGCG CGGCCTCGAT ATCCCCGCCG TCAGCCACGT CTTCAACTTC
GACGTGCCGC ACCACCCGGA GGATTACGTC CACCGGATCG GACGCACCGG CCGTGCCGGC
CGCTCGGGCC AGGCCTTCAC CCTCGCGAGC CGAAGCGACG AGCGCTCGCT CTCGGCGATC
GAGAGCCTGA TCGGTCAGCC GATCGCTTGG CTCGACGGCG ATCTTGCCAG CGTCTCCGAC
GAGGTGGAGG GCGACGAGCC GCGCCGCCGC CGCGGCAGCC GCCGGGCCAA GGAAACCAAG
GGGGGCGAGG AAACCAAGAG CGGCGGGCGC AGCACCGAGC GGAGTGCCGC CCCGGCGAGC
GAAAGCCCCC GCAGCGAGAA CCGCTCCCGC GGAGGTCGCC GTCCGGCCGC CGAGCGCAGC
CGCGCCGACG CGCCCCGGCG AGACCCGGTG CGTGAGCCGG AACCGGTTGC GGTTGTCCCT
TCCGCTCCCC CTGCCCCTCC CCGCGAGTTG GCCCGCGAGC CCGTCCGGAG CGCCCCCGAA
CGCGCGCGCG GCGAGCGTCG TCCCCCGCGT CGCGACGAGG ACGGGGAGAC GCCGGTCGGC
CTCGGCTCGC ACGTCCCGGC CTTCCTGCTG AAACCGACCG GGTTCGGGAA GAGCAAGTAA
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| Protein sequence | MSFADLGLSD KVLQAVTTAG YTEPTPIQAQ AIPHVLARRD VLGIAQTGTG KTAAFTLPML
TMLETGRARA RMPRTLILEP TRELAAQVEE NFERYGTNHK LNVALIIGGV SFADQDAKLT
RGTDVLIATP GRLLDHFERG KLLLTGVELL VIDEADRMLD MGFIPDIERI VKMVPFTRQT
LFFSATMPPE IERLADMFLH NPQRVEVARP ASTATTIEQR LVATGAEGHE KRKVLRHLIR
SASELQNGII FCNRKRDVAQ LQRSLTSHGF NAAALHGDMD QRARMAALDG FRSGEVPLLV
ASDVAARGLD IPAVSHVFNF DVPHHPEDYV HRIGRTGRAG RSGQAFTLAS RSDERSLSAI
ESLIGQPIAW LDGDLASVSD EVEGDEPRRR RGSRRAKETK GGEETKSGGR STERSAAPAS
ESPRSENRSR GGRRPAAERS RADAPRRDPV REPEPVAVVP SAPPAPPREL AREPVRSAPE
RARGERRPPR RDEDGETPVG LGSHVPAFLL KPTGFGKSK
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