Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3983 |
Symbol | |
ID | 5835596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4426158 |
End bp | 4427267 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641369774 |
Product | diguanylate cyclase |
Protein accession | YP_001641425 |
Protein GI | 163853382 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.349216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGCGG CGTGCCCCGT CCGCAGGAGC CTACGTCACC GGATGAGCCC CGATCCCGAT CGTGATCGCA GTTTCGTGCT CGCGCAGCGC AGCTTCGAGC TGATGCGCGA CTACTGTGCC TGCGCGACGC CGCGGGCCTA CGCCGTGTGG TATCTCTACG TCTCCGGCAC GCAGCCGCTG ATGAACGATG CGGTCAAACG GCTCACGACG CAGAACGGCA CGCTGACCAG CGCCGACATC GAGGGGCTCC ACGACACCTA CATCGACGGC CGCCGCATGG CCGTGGAGGT GGACCGGATG AATTCGAGCC TCATCGCCGA GGTCGAGGGC ATTATGGAGA TGATCGAGGT CTCGATCCGC TCCACCGCCC AGTACGGCGA GTCGCTTCAG GCCCTGTCCC ACGACATCGC CAACACGGCC ACGAGCCGGA CGCGTCTGCG CGAGGTCGTC ACAACGATCA TCGCCAACAC CCGCGACGTG ACCGCCAACA ACCGCACCCT CGAAGCGCGG ATGCGCGAGA GCCGCAGCGA GATCGAAGCC TTGCGCGAGA CGCTGGAGGC GACCCGTCTG GAGAGCCTGA CCGACGCCCT GACGGGGCTG GGCAACCGCA AGAATTTCGA GGAGTCGCTC CGCAAGAGCG TCGATCGGCA GTCTGCCTCA GCGCAGCAGG GCAAGCCGGC GAGCCTGATC GTGATCGACA TCGATTCGTT CAAGCGCTTC AACGACCTCT ACGGCCACCT GACCGGGGAT CAGGTGCTGC GCCTCGTCGC CATCGTGATG CGCGAGCATA TCGGTGAGAA AAACGCGACG CTCGCCCGGT TCGGCGGCGA GGAATTCGGC ATCGTCCTGC CGGAAACGGA CCGGGTCGAG GCGCGCGCCA TCGCCGAGCG GGTGCGCATC GGCGTCACCG GCCGCGAACT GGTGAAGCGC TCCACCGGGG AATCGCTCGG CAAGGTCACG GTCTCGCTCG GCGTCGCGAC CCAGCGCGAG GATGACAACG CGGTCTCCCT GCTGGAACGG GCCGATGCCT GCCTGTTCGC CGCCAAGCGC GCCGGCCGCA ACCGCACCCT CGACGAGACC GAGGTCGAGA ACCTGCGCGA CGTCGCCTGA
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Protein sequence | MWAACPVRRS LRHRMSPDPD RDRSFVLAQR SFELMRDYCA CATPRAYAVW YLYVSGTQPL MNDAVKRLTT QNGTLTSADI EGLHDTYIDG RRMAVEVDRM NSSLIAEVEG IMEMIEVSIR STAQYGESLQ ALSHDIANTA TSRTRLREVV TTIIANTRDV TANNRTLEAR MRESRSEIEA LRETLEATRL ESLTDALTGL GNRKNFEESL RKSVDRQSAS AQQGKPASLI VIDIDSFKRF NDLYGHLTGD QVLRLVAIVM REHIGEKNAT LARFGGEEFG IVLPETDRVE ARAIAERVRI GVTGRELVKR STGESLGKVT VSLGVATQRE DDNAVSLLER ADACLFAAKR AGRNRTLDET EVENLRDVA
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