| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3979 |
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| Symbol | |
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| ID | 5835592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4422187 |
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| End bp | 4423509 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641369770 |
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| Product | FeS assembly protein SufD |
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| Protein accession | YP_001641421 |
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| Protein GI | 163853378 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.557806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACG TCACCAATCT CCGCTCCCCC GCCGAGGCCG GCCTCTCCAA GCTGTTCGAG
TCCGCGCGCA AAGGCTTCGC CAGCGAGCAG GCGATCAGCC GCGAGGAGGC GTTCCGCTTC
TTCGAGGCGA CCGGCCTGCC GAGCCGCCGG GTCGAGGCGT TCAAGTATAC CGACCTGCGC
GCCGCCATCA CCGAGGCCGC CCCGCCCGCC GAGGCGCCGA GCGAGGACGC GGCCCGGGCC
GCCGTCGCCG AGACCACGGG CTTCAACGCG GTCGAGGCCG TCCGCCTCAC CTTCGTCAAC
GGCCATCTCG TCGCGTCCCT GTCGGATCTC GACCGGGTGC CCGAGGGCGT GACGGTCACG
CCGCTCAACG AGGCGATGGG CAAGGGCGAC GCCCGCCTGA AGCTCCTCGC CCCCGTCGAG
CAGGTGCGCC AGAACCCGAT CTACCAGCTC AACACCGCCT TCCTGGCGGA TGGCGCGCTG
ATCTCGGTCG CCCCCGGCGC CAAGCCGGCG ACGCCGATCC ACCTGCGCTT CGTCGGCACG
GGTGAGGCCG CCTTCTCGAC CGCGACCCGC GTTCTGGTCG ATGTCGGCGC CGAGGCGGAG
TTCTTCCTGC TGGAGAGTCA CGAGGGGCCG GCCGGGCTGA CCTACCAGCC CAACGACGCG
CTCGACGTGC ATATCGGCGC CGAGGCCGCC TTCCGCCACA CCCGGCTCAA CCGGGAAGGG
GACGCGGCCG TCGCCCTCTC GACGCTCTCG GTGCGCCTCG ACGCGCGGGC GCAGCTCGAG
ACCGTCAACC TCGTCACCGG CGCCAAGCTC TCGCGTCACC AGATCTACCT GCACGTCGCG
GGCGAGGACG CCAACGCCGT GGTCAACGGC GCGACGCTGC TCGGCCACGG CCAGCTCGCG
GACTCGACCC TGCTCGCCGA CCACGCGGCG ACGGGCGGCG TCGGCCGCGA GATGTTCAAG
ACGGTGATCG ACGGCGATTC CACCGGCGTG TTCCAGGGCA AGATCATCGT CCGCCAGGTC
GCGCAGCAGA CCGACGGCAA GATGAAGTCC GACTGCCTGC TCCTGACCGA CGACGGTCAG
ATGATGAACA AGCCGGAGCT GGAAATCTTC GCCGACGACG TCGCTTGCGG CCATGGCGCC
ACCTGCGGCG CACCGGACGA GGATCTGCTG TTCTACCTCA TGGCCCGCGG CCTGCCGCGC
GCCACCGCCG AGAGCCTGCT GGTCCAGGCC TTCGTCGGCG AGGCGGTGGA GACGGTCACG
CATGAGGGCG CCCGCGCGGT GCTGATCGGC GGGATCGAGG CGTGGCTGGC GTCGAGAGGG
TAG
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| Protein sequence | MADVTNLRSP AEAGLSKLFE SARKGFASEQ AISREEAFRF FEATGLPSRR VEAFKYTDLR
AAITEAAPPA EAPSEDAARA AVAETTGFNA VEAVRLTFVN GHLVASLSDL DRVPEGVTVT
PLNEAMGKGD ARLKLLAPVE QVRQNPIYQL NTAFLADGAL ISVAPGAKPA TPIHLRFVGT
GEAAFSTATR VLVDVGAEAE FFLLESHEGP AGLTYQPNDA LDVHIGAEAA FRHTRLNREG
DAAVALSTLS VRLDARAQLE TVNLVTGAKL SRHQIYLHVA GEDANAVVNG ATLLGHGQLA
DSTLLADHAA TGGVGREMFK TVIDGDSTGV FQGKIIVRQV AQQTDGKMKS DCLLLTDDGQ
MMNKPELEIF ADDVACGHGA TCGAPDEDLL FYLMARGLPR ATAESLLVQA FVGEAVETVT
HEGARAVLIG GIEAWLASRG
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