Gene Mext_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3976 
Symbol 
ID5835215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4418413 
End bp4419585 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content73% 
IMG OID641369767 
Productaminotransferase class V 
Protein accessionYP_001641418 
Protein GI163853375 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCG GCGCGCGCAG CTATCTCGAT CACAATGCGA CTTCTCCGGT GCGTCCGGAA 
GTCGCGTCTG CGGTCGCGCG CGCGCTCGCA TTGCCCGGCA ATCCCTCCTC GATCCATCAG
GAGGGCCGCG CCGCGCGCCA TGCGCTGCAG ACGGCGCGGG CGGGGCTCGC CGCCCTGCTC
GGCGCGGCGC TTGAGCGCAT CACCTTCACC AGCGGCGGCA CGGAAGCCGC CAACACCGTG
CTCTCCGGTG CGCTTCGGAA GGCGGGCCTC CCCGCCCCCA CCCGGCTGAT GATCTCGGCC
ACCGAGCATC CGTGCGTCGC CGCGGGCCAC CGCTTCGCGC CGGACGCGGT CGAGGTGCTG
CCGGTGGATC GGGCCGGCCT GCTGCGGCTC GACCTGCTCG CGGCCCGGCT CGAAGCCTGC
CGCGACGAGG CGGTGCTGAT CTCGGTCCAT GCGGCCAACA ACGAGACCGG GGTGGTGCAG
CCGCTCGCCG AGATCGTGCG GCTCGCCCGC GCTTACGGAC GGGCTCTGGT CCACAGCGAC
GCGGTGCAAG CGGTCGGAAA GATCCCGCTC GATTTTTCCG CCCTCGGCCT CGACGCCCTA
ACCCTGTCGG GCCACAAATT CGCCGCGCCG AAGGGCGTCG GCGCGATGGT GCTGGCCGAC
GGCGTGAGCC TGGAGGCGGC CTTCCTGCGC GGCGGCGGCC AGGAGGCGCG CCTGCGCGGC
GGCACCGAGA ACCTTTCGGG CATTGTCGGC ATGGGCGAGG CGGCGGCGAT CGCCCGATCC
AGCCTGGAAG CCGAGGTGGT GCGGCTCGCG GGTTTGCGCG ATGGCCTCGA AGCACGCCTG
CGGGCGCTCG CGCCGGACAT GGTGGTGTTC GGGGAGGGTG CGCTGCGCCT GCCCAACACG
CTGAGCTTCG CCGTGCCGGG CCTCGCGGCC TCTACGGCGC TGATCGCCCT GGATCTCGCC
GGCCTGTCCG TGTCGTCGGG CTCGGCCTGC GCCTCGGGCA AGGTGGCCCG TTCCCCCGTG
CTCGCGGCGA TGGGCTTGAG CCCTGCGCTC GCCGCGGGGG CGTTGCGCGT GAGTTTCGGC
TGGAATTCGC GCCCGGAAGA CCTCGAACGC TTCGCGGCGG GGTTCGAACG GGTCGTGTCG
TCCCTATATC AGAGGCGAGG GCAGGCAGCC TGA
 
Protein sequence
MTSGARSYLD HNATSPVRPE VASAVARALA LPGNPSSIHQ EGRAARHALQ TARAGLAALL 
GAALERITFT SGGTEAANTV LSGALRKAGL PAPTRLMISA TEHPCVAAGH RFAPDAVEVL
PVDRAGLLRL DLLAARLEAC RDEAVLISVH AANNETGVVQ PLAEIVRLAR AYGRALVHSD
AVQAVGKIPL DFSALGLDAL TLSGHKFAAP KGVGAMVLAD GVSLEAAFLR GGGQEARLRG
GTENLSGIVG MGEAAAIARS SLEAEVVRLA GLRDGLEARL RALAPDMVVF GEGALRLPNT
LSFAVPGLAA STALIALDLA GLSVSSGSAC ASGKVARSPV LAAMGLSPAL AAGALRVSFG
WNSRPEDLER FAAGFERVVS SLYQRRGQAA