Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3969 |
Symbol | |
ID | 5835674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4409782 |
End bp | 4410549 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641369760 |
Product | NUDIX hydrolase |
Protein accession | YP_001641411 |
Protein GI | 163853368 |
COG category | [R] General function prediction only |
COG ID | [COG4111] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00994363 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA CCGAGTCTGA GGCCGCCTTC CTGGCGCGCT ACGATCCCGC CGATTACGCC CGGCCCGCCG TGGCCGTCGA TCTGGTGCTG CTGGGCCTTT CCGGCGGTCG CCCGACCCTC CTGCTGCTGA AGCGCGACCG GCACCCGCAT GCGGGGCGCC ATGCGCTGCC CGGCGGCTTC GTCGGGATCG ACGAGGCGTT GGATGACGCC GCCGCGCGCG TCCTGCGCGA GAAGGCGGGC GGGGCGCGGG CGCATCTGGA GCAGCTCTAC ACCTTCGGCG CGGTGGAGCG CGATCCGCGC ATGCGCATCA TCACGGTCAC CTATCTCGCG CTCCTGACCG AGGCGGCCTT CGCCGAGGCA CGGGCGCAGG CCCCGGCCCT GATTCCCGGC GCGGTCGCGG CGTCGCCCGC GGCGGAGGGA TCCGTGACGG TCCATGCGGC CGACGGCGCG GCTTTGCCGC TCGCCTTCGA CCACGCCGAG ATCGTCGCGC TGGCGATCCG GCGTCTGCGG GGCAAGCTCG ACTATTCCGA GGTCGGCTTC GCCCTGCTGC CGGAGCTGTT CACCCTGCGC CAGCTTCAGG ACGTGCACGA GGCGATCCTC GGCACGGGCC TCAACAAGCC CGCCTTCCGC CGCCGGATGC TCGACCGCGG CTGGCTCGAC CCCACCGGCC GCTTCGAGAC GGGCACCTCC TACCGCCCCG CCGAGCTGTA CCGCCTTCGC CAAACCCCTT CCCAAACCTC TTGGCAAACC CCCGCTCAAG GAGACTGA
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Protein sequence | MSQTESEAAF LARYDPADYA RPAVAVDLVL LGLSGGRPTL LLLKRDRHPH AGRHALPGGF VGIDEALDDA AARVLREKAG GARAHLEQLY TFGAVERDPR MRIITVTYLA LLTEAAFAEA RAQAPALIPG AVAASPAAEG SVTVHAADGA ALPLAFDHAE IVALAIRRLR GKLDYSEVGF ALLPELFTLR QLQDVHEAIL GTGLNKPAFR RRMLDRGWLD PTGRFETGTS YRPAELYRLR QTPSQTSWQT PAQGD
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