| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3947 |
|---|
| Symbol | |
|---|
| ID | 5834522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 4384919 |
|---|
| End bp | 4385128 |
|---|
| Gene Length | 210 bp |
|---|
| Protein Length | 69 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641369738 |
|---|
| Product | cold-shock protein DNA-binding |
|---|
| Protein accession | YP_001641389 |
|---|
| Protein GI | 163853346 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.246482 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACTG GTACCGTGAA ATGGTTCGAT GAGGTCAAGG GCTACGGGTT CATCCAGCCC
GATACCGGGG GCAAGGACGT GTTCGTGCAT ATCTCCGCCG TCCAGCAGGC GGGCCTGCGC
GGCCTCGTCG AGGGGCAGAA GGTCAGCTTC GACGTCGAGA ACGACCGCCG CAGCGGCAAG
CCGGCCGCGG TCAACCTGCA GGCCAGTTGA
|
|---|
| Protein sequence | MQTGTVKWFD EVKGYGFIQP DTGGKDVFVH ISAVQQAGLR GLVEGQKVSF DVENDRRSGK
PAAVNLQAS
|
|---|
| |