Gene Mext_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3938 
Symbol 
ID5831010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4378041 
End bp4379528 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content66% 
IMG OID641369729 
Productreplicative DNA helicase 
Protein accessionYP_001641380 
Protein GI163853337 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.19512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGC CCAACGCCCT CACGGCCAAT CTCGAGACGG TGCAGCCCGA ATACCGGGTA 
CCGCCGCACA ACATCGACGC CGAGCAGGCC CTGCTCGGCG CGATCATGGT GAACAACGAC
GCCTATTACC GCGTCTCGGA CTTCCTGCTG CCCGAGCACT TCATGGAGGC GGTGCACCGC
CAGATCTTCG AGGTGTCGGT CTCGCTGATC AAGGCGGGCA AGCTCGCCAC GCCGATCACG
CTGAAGACCT ATCTCGGCGA CATCGACCTC GGCGGCGTCA CGCCGATGCA GTACCTCGCC
CGCCTCGCGG CCGAGGCGAC CACCGTCATC AACGCGGGCG AGTACGGCCG CACCATCTAC
GATCTGGCCA TCCGCCGCCG GCTCATCACC ATCGGCGAGG ATCTGGTCAA CGGCGCCTTC
GAGGCGCCCG TCGAGTCCCG GCCGCGCGAC CAGATCGAGG CGACCGAGCG CCGGCTCTAC
GAACTCGCCG AATCCGGCAA GTACGACGGC GGCTTCCAGA AATTCTCCGA CGCGCTGACC
GCGGCCATCG ACATGGCGGC CAAAGCCTAC CAGCGCGACG GCAAGCTCTC GGGCATCTCC
ACGGGGCTCA CCGACCTCGA CGCCAAGATG GGCGGCCTGC AGCCCTCGGA CCTCATCATC
CTCGCGGGGC GCCCGGCCAT GGGCAAGACC TCGCTCGTGA CCAACATCGC CTTCAACATC
GCCAAGGCCT ATCGCGGCGA GAAGCAGCCC GACGGCACCA TGCAGACCGT CAACGGCGGC
ATCGTCGGCT TCTTCTCCCT CGAAATGTCG GCCGAGCAAT TGGCGACCCG TATCATCGCC
GAGCAGTCCG GCGTGCCCTC CTACAAGATC CGCCGCGGCG ACATCCGCCC GGAGGACTTC
TACAAGATCA CCGACGCCGC CCGGGACATG CAGACGATCC CGTTCTACAT CGACCAGACC
GGCGGCATCT CGATCGCCCA GCTCGCCGCC CGCGCCCGCC GCCTCAAGCG CCAGAAGGGC
CTCGATCTGC TCATCATCGA CTACCTTCAG CTCCTCTCCG GCTCCGGCAA GAAGAGCGAC
AACCGCGTGC AGGAGATGAC CGAGATCACC ACCGGCATGA AGGCTCTGGC CAAGGAGCTG
GCGGTGCCGA TCATCGGTCT GTCGCAGCTC TCGCGTCAGG TCGAGAACCG CGACGACAAG
CGGCCCCAGC TCTCGGACCT GCGCGAATCC GGCTCGATCG AGCAGGACGC CGACGTGGTG
ATGTTCGTGT TCCGCGAGGA ATATTACGTC GGCAACAAGA AGCCGCGCGA GGGCACCGAG
GAGTTCTTCG CCTGGGAGGC GGAGATGCAG CGCGTCCACG GCAAGGCCGA GGTCATCCTC
GGCAAGCAGC GCCACGGCCC GACCGGCACG GTGGAGCTGC AGTTCGACGC CAACATCACC
CGGTTCTCGA ACCTGGCGCA AAGCGACCGG ATGCCCGAGC AGATGTGA
 
Protein sequence
MALPNALTAN LETVQPEYRV PPHNIDAEQA LLGAIMVNND AYYRVSDFLL PEHFMEAVHR 
QIFEVSVSLI KAGKLATPIT LKTYLGDIDL GGVTPMQYLA RLAAEATTVI NAGEYGRTIY
DLAIRRRLIT IGEDLVNGAF EAPVESRPRD QIEATERRLY ELAESGKYDG GFQKFSDALT
AAIDMAAKAY QRDGKLSGIS TGLTDLDAKM GGLQPSDLII LAGRPAMGKT SLVTNIAFNI
AKAYRGEKQP DGTMQTVNGG IVGFFSLEMS AEQLATRIIA EQSGVPSYKI RRGDIRPEDF
YKITDAARDM QTIPFYIDQT GGISIAQLAA RARRLKRQKG LDLLIIDYLQ LLSGSGKKSD
NRVQEMTEIT TGMKALAKEL AVPIIGLSQL SRQVENRDDK RPQLSDLRES GSIEQDADVV
MFVFREEYYV GNKKPREGTE EFFAWEAEMQ RVHGKAEVIL GKQRHGPTGT VELQFDANIT
RFSNLAQSDR MPEQM