Gene Mext_3934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3934 
Symbol 
ID5830983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4373506 
End bp4374624 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content67% 
IMG OID641369725 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001641376 
Protein GI163853333 
COG category[R] General function prediction only 
COG ID[COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.541831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.104471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGTA CGATCGACAG GCGCGGCTTC CTGCGGGGCT CCGCACTCTT CGCGGCCGGT 
GCCGCCGCCG GGTTCTCCTG TATCGAGATC GCGAATGCCG CGCCGATCGC GGTGCCGACG
GTCGATAAGC TGTCCCTGCG CGTCCTGATC GACTCGGCCC ACGACCAGTT CCTGAAGCCC
GCGACCGTCC AGGGCGTGCT GCATCAGCCG CCGGGCAACG GGCGCGGCGC CGATTACCGC
AAGGTGCTGC ACAATCAGTG GGGCCTGTCG CTCTTTGCCG AATCCTGGCG GGCGGAGGAG
GCGCGCACGA TCCTGCTCGA CTTCGGCTAC AGCCCCGAGG CCCTGCTCAA CAATATCGAG
ATCCTGAAGG TCGATCCTAC CAAGATCGAT GCGCTGATCG TCAGCCACGG CCACCACGAC
CATTACGGCG GCCTGACCGG GTTCCTCGAC AAGTACAGGA GCGCGCTCGC GCCCGACCTG
AAGCTCTATG CCGGCGGCGA GGACAATTTC TGCCACCGCC ACAGCCCGAG CGGCGTCCCC
GGCCAGTTCA CCGATTTCGG CCAGCTCGAC CGGCGCGAAC TGACGGCGCA GAAGATCTCG
ACCGTGCTCT GCGAGACGCC CACCGTGGTC GCCGGCCACG CCTTCACCAC GGGGCAGATC
AAGCGCGCCT CCATCGAGCG CATCCTGCCC AACACCTTCG TCGAGCGCGG CATCACCGAC
GGGCTGGGCT GCGATGCCAC CCACTATTCG CCCGCCGAAC TCCAGGGAAA GATCATCCCC
GACGAGCACG TCCACGAGCA CGCCACCTGT TTCAACGTGA AGGGCAAGGG CCTCGTGGTG
ATCTCGTCCT GCGGCCATGT CGGCATCGTC AACTCCGTGC GCCAGGCGCA GGAGGTCTCC
GGCATCGAAC GCGTCCACGC CATCGTCGGC GGCTTCCATC TCGGACCGGC GCCGAAGGAG
TACCTGACCC AGGTCGTGGC CGAGATCAAA AAACTTCAGC CCGACGTCGT CGTGCCGATG
CATTGCAGCG GCCTGAACTT CGCCCTCGAG GCGCAGGCGC AGATGCCGGA GAACGTGATC
GTCCCGACCA CCGGCAGCCG GCTCGTCTTC AGTGCGTAG
 
Protein sequence
MAGTIDRRGF LRGSALFAAG AAAGFSCIEI ANAAPIAVPT VDKLSLRVLI DSAHDQFLKP 
ATVQGVLHQP PGNGRGADYR KVLHNQWGLS LFAESWRAEE ARTILLDFGY SPEALLNNIE
ILKVDPTKID ALIVSHGHHD HYGGLTGFLD KYRSALAPDL KLYAGGEDNF CHRHSPSGVP
GQFTDFGQLD RRELTAQKIS TVLCETPTVV AGHAFTTGQI KRASIERILP NTFVERGITD
GLGCDATHYS PAELQGKIIP DEHVHEHATC FNVKGKGLVV ISSCGHVGIV NSVRQAQEVS
GIERVHAIVG GFHLGPAPKE YLTQVVAEIK KLQPDVVVPM HCSGLNFALE AQAQMPENVI
VPTTGSRLVF SA