Gene Mext_3925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3925 
Symbol 
ID5833811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4363937 
End bp4364941 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content70% 
IMG OID641369716 
Producthypothetical protein 
Protein accessionYP_001641367 
Protein GI163853324 
COG category[V] Defense mechanisms 
COG ID[COG2348] Uncharacterized protein involved in methicillin resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.117767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0555776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTC AGGTCGCGGT CATCGACCGT TCGGGGGCCG AGGATTGGGA TGAGATCCTC 
TGGCAGCAGC CGGCCGCCAA CCTCTACGCG TCCCGGAGCT GGGGCCAGTA CAAGAGCCGG
CTCGGCTGGA CCGTCCGGCA GGTCGCCCTG AACGACAACG GCGCGGATCT CGCCTACATC
CAGTACCAGG AGCGCCGCAC CGGCCCCGTG CGCCGGATCC TCGTGCAGGG GGGGGCGGTC
CTCACCGCCC GCGGGCAGTT CCGGGCGGAA GCGGTGCTCG CCGCCTTCAT CGACCATCTC
GCCCTGCGCC CGGCGGACCT GCTCGCGGTG AAGAGCTACC GGCCTCAGGA TCCGGAGGGG
GTCACCGCCC TGCTGTCGCA CGGCTTCGTG CCCGTCGTGA CGGCGATGGA TCACACGATC
GAACTCGACC TGACACCGGA CACGGACGCG ATCCTGGCCG CGGCCGACCG GCGCTGGCGG
CGCGAGGTCA ACAAGGCGAC GGGACAGCCC GATCTCACCG CCGTCTTCCT GACGGACCCG
GACGAGCGGC TGCGGGCCTT CGACACCTTC GTGCGGATGT ATGCCGCCCT CCAGCAGCGC
AAGGGCTTCT CGAGCGGCCT CGACACGGCC GCCTATCGCG ACCTCGCGGC GTCCGATCCG
CACCTGCTCT TCCTCGAAAT CCGCCAGGGC GGAGAGCCGA TCCTGGTGCG CATCGTCCAC
ACCGCGCGGG CGGTGTGGAC CGATTTCTTC ACGGCCTCGG ACGAGCGGGC ACGATCGACC
GGTGCCGCCA CCCTCGCCGT CTGGCGGATC ATCGAGCGCG CCCGCCAGGA GGGCGCCAGC
CGCTTCGATT TCGGCGGTGT CGATCCGGCC GGGAACCGCG GCGTCTTCGA TTTCAAGCGG
GCCTTGAGCC GCAACGTGAT CCAGAGCGGT CCGACCTGGA TCTACGCACG CAACGCCTTC
ATCCGCCGCG CCGCCGCGAC CGCCCTGTTC CTGCGCGCGA TCTGA
 
Protein sequence
MTAQVAVIDR SGAEDWDEIL WQQPAANLYA SRSWGQYKSR LGWTVRQVAL NDNGADLAYI 
QYQERRTGPV RRILVQGGAV LTARGQFRAE AVLAAFIDHL ALRPADLLAV KSYRPQDPEG
VTALLSHGFV PVVTAMDHTI ELDLTPDTDA ILAAADRRWR REVNKATGQP DLTAVFLTDP
DERLRAFDTF VRMYAALQQR KGFSSGLDTA AYRDLAASDP HLLFLEIRQG GEPILVRIVH
TARAVWTDFF TASDERARST GAATLAVWRI IERARQEGAS RFDFGGVDPA GNRGVFDFKR
ALSRNVIQSG PTWIYARNAF IRRAAATALF LRAI