| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3901 |
|---|
| Symbol | |
|---|
| ID | 5835668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 4337049 |
|---|
| End bp | 4338284 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641369692 |
|---|
| Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
|---|
| Protein accession | YP_001641343 |
|---|
| Protein GI | 163853300 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.90149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.139337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGTCC CGGTGCAGAC GTCCCCCGCC CGCCCCTCCG CCGCGCCGCC GCGTTTCACC
GTGGCGGTGG TGGGCGCCGG GGCGGCAGGT CTTGCTGCCG CCCTGGCGCT CGCCCGCGAC
GGGGTGGAGA CCGCGCTCGT CGGGCGTCAC GCGCCGGTGG CGGACGGGCG CACCGTGGCT
TTGCTCGACG GCTCGGTGCG GTTCCTGAGG GTGCTCGGCG CATGGGACGA GATCGCCCCG
CATGCGAGCC CGCTCGCCGA ACTTCAGATC GTCGACGACA CCGGCAGCCT GTTCCGGCCG
CCGCCCGCCC GCTTCTCGGC CGCGGAGATC GGCCTCGACG CCTTCGGCTG GAACGTCGAG
AGCGCCCGCC TCGTGGAGAC CCTGCGGCGT CAGGCCCGTA CCACGCCGGG CCTGACCCTG
TTCGAGGCGG ATTCGGCCGG CATGCGCCTC GAGCAAGGCG CCGCGGTGCT GGACCTGGAG
GATGGGCGCA GCCTCGCGGC GCAGCTCGTC GTGGGCGCCG ACGGGGGCCG CTCGCCGCTG
CGTGCGGCGT CTGCCTTGCG CACCCGCGAA TGGTCCTACC CGCAGGCGGC GCTCACCACC
CTGCTCGCCC ACGAGCGGCC CCACCGCGAC ATCTCCACCG AGTTCCACAC CCGCAACGGA
CCCTTCACCC TGGTGCCGCT CCCCGGCGGC CACCGCTCCA GCCTCGTCTG GGTCACGGCG
GAGCCGGCGG CCAAGCGGCT CTCGGGGCTC GACGACCGGG ATCTCGCCGC AGCGGTGGAG
CATCAGGCCC GCTCGATGCT CGGCGCCATG CGGATCGACG GTCCGCGCGG CCTCGTGCCG
ATGCGCGGCC TCTCGGTGGA GCGGCCGGTG GCCGATCGCC TCGCCCTGAT CGGCGAGGCC
GCCCATGTCT TCCCGCCGAT CGGGGCGCAG GGGCTCAATC TCGGCCTGCG CGATGCGGCG
GCCATGCGGG ATGCGGTGTT CTCCGCCCGC GAGGCGAACC GGGATCCGGG GGCACCGGCC
TCGCTCGCGG GGTTCGGACG CAACCGGGGC GTCGATGCGC GTCTGCGCGG GGCGGCGGTG
GACATGCTCA ACCGCTCGCT GCTCACCGAT TTCCTGCCCG TCGATGCCCT GCGGGGCCTC
GGCCTCGTGG TGCTCGGCGC GATCCCGCCT CTGCGGCGCA TCATCATGCG CGAGGGCGTG
CAGCCGCGCC TCGGCGCGCC GAGCCTGATG CGCTGA
|
|---|
| Protein sequence | MTVPVQTSPA RPSAAPPRFT VAVVGAGAAG LAAALALARD GVETALVGRH APVADGRTVA
LLDGSVRFLR VLGAWDEIAP HASPLAELQI VDDTGSLFRP PPARFSAAEI GLDAFGWNVE
SARLVETLRR QARTTPGLTL FEADSAGMRL EQGAAVLDLE DGRSLAAQLV VGADGGRSPL
RAASALRTRE WSYPQAALTT LLAHERPHRD ISTEFHTRNG PFTLVPLPGG HRSSLVWVTA
EPAAKRLSGL DDRDLAAAVE HQARSMLGAM RIDGPRGLVP MRGLSVERPV ADRLALIGEA
AHVFPPIGAQ GLNLGLRDAA AMRDAVFSAR EANRDPGAPA SLAGFGRNRG VDARLRGAAV
DMLNRSLLTD FLPVDALRGL GLVVLGAIPP LRRIIMREGV QPRLGAPSLM R
|
|---|
| |