Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3899 |
Symbol | |
ID | 5834887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4335493 |
End bp | 4336344 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641369690 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001641341 |
Protein GI | 163853298 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.496651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.126944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTGG ACACCGAAAT TTCCTCGAGG CTCGCACCGG CTCCGCGCGG ATGGCTCAAG CGCGGGCTCG CCGCGCTGAT GCTCTCCGGG CTCGCGGCCT GCGCCGCGCA GAACGACTTC TATCCCACCA AGGGCGATGC CAAGCCCCAT CCCGGCGTCG CGCGGGCCAA GGGCCACCCG ATCCAGGGCA TCGACATCTC GAAATGGCAG GGGCCGATCA ACTGGGCCTC GGTCAAGAGC GCGGGCACGC AATTCGCCTA CATCAAGGCG ACGGAGGGCG GCGACCACGT CGACGAGCGC TTCCTCGAAA ACTGGGACGG TGCGGGCCGC GCCGGCGTGC CGCGGGGCGC CTACCACTTC GTGTTCTGGT GCCGCTCGGC CGAGGACCAG ATGGCGTGGT TCAAGCGCAA CGTGCCGAAC GACCCGACCG CCCTGCCCCC GGTGCTCGAC GTGGAGTGGA ACGGCCACTC GGCGAAGTGC CCGAAGAAGC TGCCCAAGGC CCAGGCCCTG TCGATGATCC GCTACATGCT GGACGAGATG GAGGCCTATA CCGGCAAGCG GCCGATCATC TACACGGACA TCACCTTCCA CAAGGACGTG CTGGAAGACG AGCTGCCCGA CTATCCCCAC TGGGTCCGCT CCACGGCGGC CGAGCCCGAG CAGCGCTATG CTAACCGCAA GTGGATGCTC TGGCAGTTCA CCTCGACCGG GCGCGTGCCC GGCGTGCGCG GCGACGTCGA TCGCAACGCC TTCTACGGCA GCCCGACCGA GTGGGCCTCG TTCCTCGCCA CCGATTGCGA CCCGCGGGAG CATCGGCGCC TGTCGAGCCA GGGCCTCTGC ACCGGCAAGT AG
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Protein sequence | MSLDTEISSR LAPAPRGWLK RGLAALMLSG LAACAAQNDF YPTKGDAKPH PGVARAKGHP IQGIDISKWQ GPINWASVKS AGTQFAYIKA TEGGDHVDER FLENWDGAGR AGVPRGAYHF VFWCRSAEDQ MAWFKRNVPN DPTALPPVLD VEWNGHSAKC PKKLPKAQAL SMIRYMLDEM EAYTGKRPII YTDITFHKDV LEDELPDYPH WVRSTAAEPE QRYANRKWML WQFTSTGRVP GVRGDVDRNA FYGSPTEWAS FLATDCDPRE HRRLSSQGLC TGK
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