Gene Mext_3899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3899 
Symbol 
ID5834887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4335493 
End bp4336344 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content68% 
IMG OID641369690 
Productglycoside hydrolase family protein 
Protein accessionYP_001641341 
Protein GI163853298 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.496651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.126944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGG ACACCGAAAT TTCCTCGAGG CTCGCACCGG CTCCGCGCGG ATGGCTCAAG 
CGCGGGCTCG CCGCGCTGAT GCTCTCCGGG CTCGCGGCCT GCGCCGCGCA GAACGACTTC
TATCCCACCA AGGGCGATGC CAAGCCCCAT CCCGGCGTCG CGCGGGCCAA GGGCCACCCG
ATCCAGGGCA TCGACATCTC GAAATGGCAG GGGCCGATCA ACTGGGCCTC GGTCAAGAGC
GCGGGCACGC AATTCGCCTA CATCAAGGCG ACGGAGGGCG GCGACCACGT CGACGAGCGC
TTCCTCGAAA ACTGGGACGG TGCGGGCCGC GCCGGCGTGC CGCGGGGCGC CTACCACTTC
GTGTTCTGGT GCCGCTCGGC CGAGGACCAG ATGGCGTGGT TCAAGCGCAA CGTGCCGAAC
GACCCGACCG CCCTGCCCCC GGTGCTCGAC GTGGAGTGGA ACGGCCACTC GGCGAAGTGC
CCGAAGAAGC TGCCCAAGGC CCAGGCCCTG TCGATGATCC GCTACATGCT GGACGAGATG
GAGGCCTATA CCGGCAAGCG GCCGATCATC TACACGGACA TCACCTTCCA CAAGGACGTG
CTGGAAGACG AGCTGCCCGA CTATCCCCAC TGGGTCCGCT CCACGGCGGC CGAGCCCGAG
CAGCGCTATG CTAACCGCAA GTGGATGCTC TGGCAGTTCA CCTCGACCGG GCGCGTGCCC
GGCGTGCGCG GCGACGTCGA TCGCAACGCC TTCTACGGCA GCCCGACCGA GTGGGCCTCG
TTCCTCGCCA CCGATTGCGA CCCGCGGGAG CATCGGCGCC TGTCGAGCCA GGGCCTCTGC
ACCGGCAAGT AG
 
Protein sequence
MSLDTEISSR LAPAPRGWLK RGLAALMLSG LAACAAQNDF YPTKGDAKPH PGVARAKGHP 
IQGIDISKWQ GPINWASVKS AGTQFAYIKA TEGGDHVDER FLENWDGAGR AGVPRGAYHF
VFWCRSAEDQ MAWFKRNVPN DPTALPPVLD VEWNGHSAKC PKKLPKAQAL SMIRYMLDEM
EAYTGKRPII YTDITFHKDV LEDELPDYPH WVRSTAAEPE QRYANRKWML WQFTSTGRVP
GVRGDVDRNA FYGSPTEWAS FLATDCDPRE HRRLSSQGLC TGK