Gene Mext_3898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3898 
Symbol 
ID5834886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4334477 
End bp4335238 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID641369689 
Productregulatory protein Crp 
Protein accessionYP_001641340 
Protein GI163853297 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0891135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCGG CCACAGAGCG CTGCTTTGAA GGCAATCTGC TCCTGAACTG TCTGAGCCCT 
GAGGATCGCG GCCTGCTTCT GCCCGATCTG GAGCGGCTGG AATACCAGCG CGGCGAGACG
CTGTTCGCCG CCGGCCGCGA GGTGGATTTC ATCACCTTCC CCCTCGAGCA GACCGTGGTC
ACCCTGCTGA TCTCGATGAT CGACGGGCGC AGCGCCGAGA CTGCCACGAT CGGCCGCGAG
GGCGCGGTGG GAGGCGTGGT CAGCAATGGC GGCCTGCCCG CCTCGACCCA TGCCCTGATC
CAGATCGCCG GTCCGGTCCT GCGGATGGAC TCGGTCCGGC TTCAAGAGGC CAAGCGCCGC
TCGGAATCCC TGCGCAACCT GTTCACCCGC TACTCCGACT GCCTGCTCGC GCAGGTGCTG
CAATCGGTCG CCTGCAACGC CCTCCATCCG ATCGAGGAGC GCTGCCTGCG CTGGCTCCTG
ACGCTTCAGG ACCGCCTCGA CAACAACGTT CTGCCGATCA CCCAGGAATC GCTCGCCGCG
ATGCTCGGCG TGCAGCGCAC CTATCTCACC CGCATCCTGC GGATGCTGCA GCAGCAGGGA
CTGATCGAGG TCGGGCGCGG GCGCATCACC GTCGTCAACC GGGCGGCGAT CGAGGAGGTC
GCCTGCGAGT GCCATGCCTG CGTCAAGCGC CATTACGAGA CCGTGCTCGG CGCGGTCTAC
AGCCCGAGCG GGCGCCTCAT CGCCATCGAG CCGCCCGAGT AG
 
Protein sequence
MPSATERCFE GNLLLNCLSP EDRGLLLPDL ERLEYQRGET LFAAGREVDF ITFPLEQTVV 
TLLISMIDGR SAETATIGRE GAVGGVVSNG GLPASTHALI QIAGPVLRMD SVRLQEAKRR
SESLRNLFTR YSDCLLAQVL QSVACNALHP IEERCLRWLL TLQDRLDNNV LPITQESLAA
MLGVQRTYLT RILRMLQQQG LIEVGRGRIT VVNRAAIEEV ACECHACVKR HYETVLGAVY
SPSGRLIAIE PPE