| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3897 |
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| Symbol | |
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| ID | 5834885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4331459 |
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| End bp | 4334251 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641369688 |
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| Product | PAS sensor protein |
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| Protein accession | YP_001641339 |
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| Protein GI | 163853296 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.240133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAC CGCCCGACGA TTGTCCAGCA TCCGGTGAGG CCGGCGCAGA GGCCGAGAGG
CTGGCCGCGC TGGCCTGCTA CGGCATCCTC GACACGCCCG CCGAGGCCGC GTTCGACGAT
GCCGTGGCCT TGGCCGCCCA GCTCTGCGCC ACGCCGACCG CCCTCGTCAG CCTGGTGACC
GGCGACCGGC AATGGTTCAA GGCGCGGCTC GGCTTCGCCC CCGGCGAGAC CGGGCTCGAC
CGCTCGGTCT GCGTTCACGC CCTGGCCGGG CGGGGCTTGC TGGTCATCCC CGATCTCGCG
GCCGACCCGC GCACCCGCAC CAACCCGCTG GTCACGGGAG AGCCCGGCAT CCGCTTCTAT
GCCGGCGCCC CCCTGGTGAC GCCTGAGGAT CGGGCGATCG GCACCCTGTG CGTGCTCGAC
ACCAAGCCCC GGCCGGAGGG TCTGAGCGCG GCCCAAGGGG CCGGTCTCGA AGCGCTCGCC
CGCACGGTGA TGACGCAGCT CGAACTGCGC CGGGGCATCG CGGCCCGGAA GACCGAGGCC
GCGGCCCTGG CCGACAGCGA GTTCCGTCTG CGGCTCGCGA TCGAAGCGGC CGGTGCCGGC
ATCTTCGACT ACGACCTCGT GGCGGGCACC CTCGCCTGGG ACGGGCGGAC CCGCGCCCTG
TTCGGGGTCG GGCCGGACGA GGCCGTGAGC TATGCCGGCA CGTTCCTCGC CCGCCTCCAC
CCCGAGGACC GGGCGCGCAC CGATGCCGCC GTGCAGGCGG CCCTCGACCC GGCCGGGCCC
GGCCTGTTCG ACGCCACCTA CCGCACCGTG ACGGCGGACG GCACGGTGAT CGCCTGGGTC
GCGGCCCGCG GCACCCTCGT CGTCGAAACG GATGAGGGGA TCAAACGGGC GCGGCGCTTC
GTCGGCACGG TGCGCGACGT CACCGCCGAG CGCACGGCGC AGGTCGCCGT CGCCGCCACC
GAGGAGCGCT ACCGCCTCGT CACCCGCGCC ACCAACGACG CGATCTGGGA CTGGGACCTC
GCCGCCGACC ACGTGCTGTG GAACGAGGCC CTTCAGGCCG CCTATGGCTG GGCGCCGGAG
ACGGTCGAGC CGACGGGCCG GTGGTGGCTC GACCACATCC ACGCCGAGGA TCGCCCCCGC
GCCGAGGCGG GTATCCGCCG CGTCATCGGC GGCGGCGGCC ACGATTGGCA CCACGAATAC
CGCTTCTGCC GCGCCGACGG CGCCTACGCC GACGTGCTCG ATCGCGGTTC GATGGTGCGC
GGGGCCGACG GCAGGCCGCT GCGCATGATC GGCGCCATGC TGGATCTGAC CGAGCGCAAC
CGCGTCGCCG CCCAGCTCCG GGCGGTGGTC GAAGGCGCGA ATATCGGCAT CGTGCAGATC
GATCCGCGCA CCATGATCGC GCTGGAGGCC AACCCGAAGC TCTGCGCGAT CTGGGGGGCG
GAGGAATCCG ACATCGTCGG GCATTCCATT GCCAAGTGGA CGCCGGAAGC GGATGCGGCG
GAGCGCGACC AGCTCCACCG CCGGCTCGCC GCGGGCGAGA TCGTGCGCGA GACCCTGGAG
AAGCGCTACC GCCGCAAGGA CGGGCGCCTG ATCTGGGGCC GGGTCAACCT CGTCTCGCAG
GCCCGCGGCG AGGCGCTCCA GGCCACGGCG ATGATCGAGG ACATCACCGC GGAGAAGGCG
ACCGAGGCAC GCCAGACGGC GCTGATCGAA CTCGGTGACA CCTTGCGCGA CGCCGCCGGC
CCCGCCGAGA TCCGTGGGAT CGCGGCCCGG ATCCTTAGGC GCAGCCTCGA CCTCTCGGAG
GCGGGCTACG CGGCCATCGA TGCCACCGTC GGCGGCTTTG CGATCGGGCG CGCGAGACCG
GACGGGACGA TGAGCCCCGC GCCGTTTCCG GCCATGCTCG CGCGGCTGCG CCGCGGCGAG
ATCCTGGCCG TGCCCGATCT GACCGCCGAA CCGGACCTCG CGCCGGATGC AGGCGGCTAC
GCGGCGGCCG GCGCCCGTGC GCTGATCGGC GTGCCCTTGA CCCGGCGGGG CGTCCTCGTC
GGCCTCGTCT ATGCCCACGC CGCCGAACCC CGGACCTGGG ACGCGGGCGA GGTCGATTTC
GTCCGCGAGG TGGCCGGACG GATCTCCGTG GCGCTCGCCC GCATCCAGGC CGAGGAGCAG
CAGCGCTTCC TCAACCGCGA ACTGAGCCAC CGGTTGAAGA ACACCCTGAC CATGGCCCAG
GCCATCGCCT CGCAGACGCT GCGCAACGCC ACCGACATCG CCTCGGTGAA GGAGGCGCTG
GTGGCCAGGC TGGTGGCGCT CGGCAAGGCG CACGACATCC TGCTCTCGGG CGAGGGCGAG
GGGGCGGCGC TGCAGGCGGT GATCGCCGGC GCGCTCACCA TCCACGACGA CGGCGAGCCC
GGCCGCATCC ACCTGTCCGG CCCAGCCCTG GAGGTCGGGC CGAAAGCCGC GCTGTCGCTG
GCGCTGATGA TCCACGAACT CGCCACCAAT GCCGCCAAGT ACGGCGCCTT CTCGGTGCCG
GGCGGGCGCG TCGGGGTGAA CTGGCACGTC GCGCGGGCGC GTTGGCCGGA GGACGCGGAG
GATGCGGGGG AGGCCGAGCC GGTCATCACG ATGACCTGGG CCGAGACCGG CGGACCGCCG
GTCGCCGCGC CCACCCGCAA GGGCTTCGGC TCGCGGCTGA TCGAGCGCGG GTTCTCCGGG
GCGGTCGGCG GCGAGACGCA GATGATCTAC GCCCGAGAAG GGGTGACGTG CCGGATCAGG
GCGCCCCTGA AGGGTCTTCT CGAAAAAGAA TAG
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| Protein sequence | MSRPPDDCPA SGEAGAEAER LAALACYGIL DTPAEAAFDD AVALAAQLCA TPTALVSLVT
GDRQWFKARL GFAPGETGLD RSVCVHALAG RGLLVIPDLA ADPRTRTNPL VTGEPGIRFY
AGAPLVTPED RAIGTLCVLD TKPRPEGLSA AQGAGLEALA RTVMTQLELR RGIAARKTEA
AALADSEFRL RLAIEAAGAG IFDYDLVAGT LAWDGRTRAL FGVGPDEAVS YAGTFLARLH
PEDRARTDAA VQAALDPAGP GLFDATYRTV TADGTVIAWV AARGTLVVET DEGIKRARRF
VGTVRDVTAE RTAQVAVAAT EERYRLVTRA TNDAIWDWDL AADHVLWNEA LQAAYGWAPE
TVEPTGRWWL DHIHAEDRPR AEAGIRRVIG GGGHDWHHEY RFCRADGAYA DVLDRGSMVR
GADGRPLRMI GAMLDLTERN RVAAQLRAVV EGANIGIVQI DPRTMIALEA NPKLCAIWGA
EESDIVGHSI AKWTPEADAA ERDQLHRRLA AGEIVRETLE KRYRRKDGRL IWGRVNLVSQ
ARGEALQATA MIEDITAEKA TEARQTALIE LGDTLRDAAG PAEIRGIAAR ILRRSLDLSE
AGYAAIDATV GGFAIGRARP DGTMSPAPFP AMLARLRRGE ILAVPDLTAE PDLAPDAGGY
AAAGARALIG VPLTRRGVLV GLVYAHAAEP RTWDAGEVDF VREVAGRISV ALARIQAEEQ
QRFLNRELSH RLKNTLTMAQ AIASQTLRNA TDIASVKEAL VARLVALGKA HDILLSGEGE
GAALQAVIAG ALTIHDDGEP GRIHLSGPAL EVGPKAALSL ALMIHELATN AAKYGAFSVP
GGRVGVNWHV ARARWPEDAE DAGEAEPVIT MTWAETGGPP VAAPTRKGFG SRLIERGFSG
AVGGETQMIY AREGVTCRIR APLKGLLEKE
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