| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3894 |
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| Symbol | |
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| ID | 5834321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4326418 |
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| End bp | 4327695 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641369685 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001641336 |
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| Protein GI | 163853293 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.366041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCCCTC CCGTGTCGCG CCCGGAACAA ATCCGGCGGG CGCCCCCGTC CTGCTGTTGG
AGAGTGGATT TCGTGCGGTC AGGCGTCGGC TTCGTCATCA CCGGCCTCGT CGTCGGCGCG
CTCGGAATCG CCGGAGGGGC GTGGTGGGGG GCCGGGCACC CGATCCCCGG CTTTCTCGCC
CATCACCTCA AGGTGGCGGG TCGGGCCGGA CCCAAGAAGA AGGAAGAGCC GCGGCTGGCG
GTGAAGGCGG TGCGCGCCAG CCGCCAGGAT GTGCCGGTCG CCTTCGAATA TACCGGCACG
ATCGTCTCGC CCCGTGACGC CGCGCTCCAG GCTCGGGTGA CCGGCTTCGT GATGGAGCGC
CCGTTCGAGC CCGGCGGCCA TGTGAAGAAG GGTCAGGTGC TGTTCCGCAT CGACCCGCGC
CCGTTCGAGG TCGCCCTCAA ATCGGCCGAG GCCCTGCGCG ACCAGGCCAA GGCCACCGTC
TCGTTCGCCC AGGCCGAGGT GAACCGCACC GAGCAGCTCG CCGACAAGGG CTTCGCCACT
GAGCAGCGCG CCCAGCAGAA CCAGTCGAAC CTCGCCACCG CCACCGCCAA GCTCGAAGAG
GCGGAGGCCG CCATCGCCCG CCAGCGGCTG AACCTCGAAT ACGCGGTGAT CCGCGCGCCC
TTCGACGGGC GCTCCAGCCT GTCCATGGCC AATATCGGCG ACATGGTGAT CGAGAATCAG
ACCAGCCTCG TCTCCGTGGT GCAGGTGAAC CCGATCGACG TGCAGATGGC GCTCTCCTCC
GAGGATGCGG AGGCGGTGCG GGTCGCTCAA GGAGAGGGGC GGGTGAAGGT CCAGCTCCTC
GACGTGGGGC GCGAGCCCGT GCGCGAGGCC ACGATCTACC GCCTCGACAA CCGCTTCGAT
CCCCGCACCG GCCGCCGCTT GATCCAGGCC TGGCTCGACA ATGCGGACGA GCGCTACCTG
CCCGGCCGGT TCGTGCGCGC CCGCATCGAG GTCGGCCGGC AGGATCGGCT CCTGGTGCCG
ACGGTCGCGC TCTCGGCCCA GCTCGACCAG CAGGTGGTCT GGACCGTGGA CGACACCGGC
ACGGTCCACA TGACCGCGAT CGAGGTCGGT GACGTCTACG GCGACAACAC CGCCGTGCTC
AAAGGCCTCA AGCCCGACAC GCTGGTCGTG ACCGACCACC TCCAGAGCCT GCGCCAGAAC
CTCAAGGTCG AGCCGCGCAT CGGCGACGAG GTCAGCGCCG TGGGCAACAC CCCCGCCCAG
GGCGAGGCGC GGCACTGA
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| Protein sequence | MFPPVSRPEQ IRRAPPSCCW RVDFVRSGVG FVITGLVVGA LGIAGGAWWG AGHPIPGFLA
HHLKVAGRAG PKKKEEPRLA VKAVRASRQD VPVAFEYTGT IVSPRDAALQ ARVTGFVMER
PFEPGGHVKK GQVLFRIDPR PFEVALKSAE ALRDQAKATV SFAQAEVNRT EQLADKGFAT
EQRAQQNQSN LATATAKLEE AEAAIARQRL NLEYAVIRAP FDGRSSLSMA NIGDMVIENQ
TSLVSVVQVN PIDVQMALSS EDAEAVRVAQ GEGRVKVQLL DVGREPVREA TIYRLDNRFD
PRTGRRLIQA WLDNADERYL PGRFVRARIE VGRQDRLLVP TVALSAQLDQ QVVWTVDDTG
TVHMTAIEVG DVYGDNTAVL KGLKPDTLVV TDHLQSLRQN LKVEPRIGDE VSAVGNTPAQ
GEARH
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