| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3888 |
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| Symbol | |
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| ID | 5834406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4316555 |
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| End bp | 4317109 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641369679 |
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| Product | sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_001641330 |
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| Protein GI | 163853287 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.178328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.202136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACGCCGC ACGACGGAGA ACTGGCCGGG CTGCTGGACC GCGTCGCCCG CCGGGACGTG
GCCGCCCTGC GGGCGCTCTA CGACCGGACC GCGCCGAAAC TTTTCGGGAT CATCCTGCGT
ATCCAACGAG ACCGGAGCCT CGCCGAGGAC GTGCTTCAGG ATGTCTACCT GAAGCTCTGG
CAATCGGCGG GCTCCTACGC GCCCTCGGCC GGGGCCCCGC TTCCGTGGCT GTGTACGATC
GCGCGCAACC GGGCCATCGA CGGCCTGCGC CGCCGGAGCG AGGTTCCGAT GCCGTCTGGT
GACAGCGGGG AGGCCTGGAT GGAGCGCCTC GTCGCCCCGA CCGACGAGGA AGGCGCCTTC
CTCGACCGCG AGGCGCTCGT CGCCTGCCTG TCCCGGCTCG ATCCGACCCA GCGCGACTGC
GTCGTGCTGG CCTATTGCGA GGGCTGGTCC CGCGAGGAAC TCGCCGAACG CTTCGAGCGG
CCCGTCAACA CCGTGAAGAC CTGGCTGCAC CGGACGCTGG CTGCCCTGAA ATCCTGCCTG
GAGCATATCG CGTGA
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| Protein sequence | MTPHDGELAG LLDRVARRDV AALRALYDRT APKLFGIILR IQRDRSLAED VLQDVYLKLW
QSAGSYAPSA GAPLPWLCTI ARNRAIDGLR RRSEVPMPSG DSGEAWMERL VAPTDEEGAF
LDREALVACL SRLDPTQRDC VVLAYCEGWS REELAERFER PVNTVKTWLH RTLAALKSCL
EHIA
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