| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3885 |
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| Symbol | |
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| ID | 5834403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4311761 |
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| End bp | 4313305 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641369676 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_001641327 |
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| Protein GI | 163853284 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.105602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGCTT CGCCGACGCG GCGATGGCGC GCATCCTGTC CCTCGCGCCG GCCGCGCCCC
GCCTCGCCTG CGGTGCCCGC CCGCATTGAT CGCGCGGCCG CGGGGTTCTA TTCCGTTGCG
ATGACGAACC CGATCCATAT CGTCGGCGGT GGCCTCGCCG GTTCCGAAGC GGCCTGGCAG
GTCGCGCAGG GCGGCCGCAC GGTCGTGCTG CACGAGATGC GGCCCGTTCG CGCCACCGAT
GCCCACCACA CCGACGGGCT GGCCGAACTG GTCTGCTCCA ATTCCTTCCG CTCGGACGAC
GCCAACGGCA ACGCCGTCGG CCTGCTGCAT CAGGAGATGC GCAGCCTCGA CTCGCTGATC
ATGCGCACGG CCGACGCCCA CCAAGTGCCC GCGGGCGGGG CGCTCGCCGT CGATCGCGAG
GGGTTTTCGC GGGCCGTCAC CGCGGCGCTG GAGGATCACC CCAACATCAC CATCCTCCGC
GAGGAGGTCG CCGGCCTTCC CCCCGAGGAC TGGGGTTCGA CCATCCTCGC CACCGGCCCC
CTCACCTCCC CGGCGCTGGC CGAGGCCGTC GGCACGCTGA CGGGCCGGGA ATCGCTCGCC
TTCTTCGACG CCATCGCCCC GATCGTCCAC CGCGACTCGA TCGACATGGG CAAGGCGTGG
TTCCAGTCCC GCTACGACAA GGCCGGCCCC GGCGGCACGG GGGCGGACTA CCTCAACTGC
CCGATGGACC GGGAGCAGTA CGAGGCCTTC GTCGCCGCGC TGATCGCGGG CGAGAAGACG
GCGTTCAAGG AGTGGGAGGC CTCGACCCCC TATTTCGATG GCTGCCTGCC GATCGAGGTG
ATGGCCGAGC GCGGGCCCGA GACCCTGCGC CACGGGCCGA TGAAGCCGGT CGGGCTCACC
AACCCGCACA ACCCGACGGT GAAGGCCTAC GCCATCGTCC AACTGCGCCA GGACAATGCG
CTCGGCACCC TGTTCAACAT GGTGGGCTTC CAGACCAAGC TGCGCCACGC CGAGCAGGTC
CGCGTCTTCC GCACGATTCC GGGGCTGGAG AATGCCGAGT TCGCCCGGCT CGGCGGCCTG
CACCGCAACA CCTATCTCGA CAGCCCGCGC CTGCTCGACG CGACCCTGCG GCTGAAGGCA
CGGCCCCAGC TTCGCTTCGC CGGCCAGATC ACCGGATGCG AGGGTTACGT CGAGAGCGCC
GCGGTCGGGC TGATGGCCGG CCGCTACGCG CTCGCCGAGG CGGAGGGGCA GACGCTCGCT
CCCCTGCCCC CGACGACCGC GCTCGGGGCA CTCATCGGCC ATATCACCGG CGGACACGTC
GAGGCGACCG AGGAGGCGGA GCGCAACGCG CCGCGCTCGT TCCAGCCGAT GAACGTGAAT
TTCGGGCTGT TCCCGCCGCT GGCGCAGATG CCGCGCAACG AGACCGGCAA GCGCCTGCGC
GGGCCCGAGA AGGCGGCGCT CAAGAAGCGC GCGCTCACCG ACCGGGCGCG GGCAGACCTC
GCTGCCTGGA TGACGGGTGA GCGACTTCCG CACGCGGCGG AGTAG
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| Protein sequence | MRASPTRRWR ASCPSRRPRP ASPAVPARID RAAAGFYSVA MTNPIHIVGG GLAGSEAAWQ
VAQGGRTVVL HEMRPVRATD AHHTDGLAEL VCSNSFRSDD ANGNAVGLLH QEMRSLDSLI
MRTADAHQVP AGGALAVDRE GFSRAVTAAL EDHPNITILR EEVAGLPPED WGSTILATGP
LTSPALAEAV GTLTGRESLA FFDAIAPIVH RDSIDMGKAW FQSRYDKAGP GGTGADYLNC
PMDREQYEAF VAALIAGEKT AFKEWEASTP YFDGCLPIEV MAERGPETLR HGPMKPVGLT
NPHNPTVKAY AIVQLRQDNA LGTLFNMVGF QTKLRHAEQV RVFRTIPGLE NAEFARLGGL
HRNTYLDSPR LLDATLRLKA RPQLRFAGQI TGCEGYVESA AVGLMAGRYA LAEAEGQTLA
PLPPTTALGA LIGHITGGHV EATEEAERNA PRSFQPMNVN FGLFPPLAQM PRNETGKRLR
GPEKAALKKR ALTDRARADL AAWMTGERLP HAAE
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