| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3867 |
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| Symbol | |
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| ID | 5833901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4293668 |
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| End bp | 4295770 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641369657 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001641310 |
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| Protein GI | 163853267 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.200227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGA ACGACCTCGA AGAACTCGCG CGAATCGCCT TCGACTGGCT CTGGGCCACC
GATGCCGAGG ATCGATTCAG CTACGTCTCC CCAGGCGCCG AGCGTGTGCT GGGCCGCTCT
CCGGCGGAGC TGATCGGGCT CACGCGGTCG GCCCTGGTCT GCGAGGGGGA GGGTGAGAGC
CTTGCCGTCT ACCGCGAGAC GATCACCGCC CGCCGCCCGT TCCGCGACCT GACCTACGTC
TACCGCCATC CCGACGGCAC GCCGCGCTGG TTCGAGATCA GCGGCCGCCC GCATTTCTCG
CCCGAGGGCG ATTTCCTGGG CTATCACGGC GTCGGCAGCG ACGTCACCGA GCAGCACCGG
ACCCGGTGCG CCCTGGTCGA GGCGCACGCC GAACTCAGCG AGCAGAACCG GCGCTTCGAC
GCGGCCCTGG AGAACATGAC GCACGGCCTG TGCATGTTCG ATGCGGAGCA GCGGCTCGTG
GTGTGGAACC GGCGCTACCT GGGGATCTTC GGCCTGCCCG ACGACGCGGT CCATGTCGGC
ATGGGCCAGC GCGCCATCAT CGAGATGCTG GTGGCGCGCG GGTGCTACAA GCGCGGCGCC
ACGGTCGATG CGATCAGCGA GGGCACCCGC ACCTCGCTCA GCGGAGACGG GTCGAAATCG
GTTTTGCGCG AACTCGCCGA CGGGCGGGTC ATCGCCGTGA TCCACCGGCC CATGGCCGAT
GGCGGCGGCT GGGTGGCGAC CTTCGAGGAC ATCACCGAGC GGCGGCGCAA CGAGGCGCGC
ATCATCCACA TGGCCCGCCA CGACGGGCTC ACCGACCTGC CGAACCGCAC CCACCTGCGC
GAGGTCGGCG CCGAATGGCT CGCGGCGTTG CGCACCGCCG CGGAGGCGCC GCTCGCGGTG
CTCTGCCTCG ACCTCGACCG CTTCAAGCCG GTCAACGACA GTTTCGGCCA CGCGGTGGGC
GATGCCCTGC TGCGGGCGGT GGCCGATCGG CTGCGCGGGC ACGTGCGCAG CCACGACGTG
GTGGCCCGGC TCGGCGGCGA CGAATTCGCG GTGCTGTCCC GCGTCGAGGA TGCGGCCGCG
GCCGCGACCC TGGCCGAGCG CCTGATCGAG ACCGTGGCCG CGCCCTACAC CCTCGACGGG
ATCACCGTCG AGATCGGGAT GAGCGCCGGC ATCGCCCTAG CCGAGGGCGA CGTCCCGCAC
GACATCGAGC GCCTCCTCAA GGAGGCCGAC CTCGCCCTCT ACGAGGCGAA GACCGAGGGG
CGCGGCACGG TCCGCCTGTT CGAGCCGCAG ATGGACGAGA CTCTGCGCGA ACGGCTCGGC
CTCGAACGCG AGCTGCGCGA GGCGCTCGCG CAGGACCGGT TCGAACTGCA TTATCAGCCG
CTCGTGGACC TGTCCGACAA CCGCATCACC GGCATGGAGG CGTTGATCCG CTGGCACCAT
CCCGAGCGCG GGCTCGTGAG CCCGGCGGTG TTCATCCCGC TCGCCGAGGA GACCGGCCTG
ATCGTGCCGA TCGGCGAATG GGTGCTGCGC CAAGCCTGCC GGGACGCGGT GGACTGGCCG
GGCGAAATCA GCGTGGCCGT CAATGTCTCG CCGCTGCAAC TGCGCCACCG CGGCTTCATC
CAGAGCGTGC TCGGCGCGCT CGCGGCCAGC GGCCTCAAGG CGAGCCGGCT CGAACTGGAG
ATCACCGAGA ACGTGCTGCT CGACGACACC GAGGCGAACC TCGAAACGCT CCACACCCTG
CGCAAGCTCG GCGTGCGCAT CTCCATGGAC GATTTCGGAA CCGGCTATTC CTCGATCAGC
TACCTGCGCC GCTTCCCCTT CGACAAGATC AAGATCGACC GTTCCTTCGT GCGCGACTGC
GCCGCCGAGT CGGAGGCCGG CGCGATCATC CGCGCCATCG TGAGCCTGGG GGCAAGCCTC
GGCATCACCA CCCTGGTCGA AGGCGTCGAG ACCGAGCCGC AGCTCGCCAC CATCCGGGCC
GAGGGGGCGC AGGAGGTGCA GGGTTACCTG TTCAGTCCGC CCCGCCCGGT TCACGAGATC
GCCGTCCTGC TCGAAGCCGG GACCACGGCC GAGGGCCGGC CCGGGCGGAC GCTGGCAGCC
TGA
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| Protein sequence | MPLNDLEELA RIAFDWLWAT DAEDRFSYVS PGAERVLGRS PAELIGLTRS ALVCEGEGES
LAVYRETITA RRPFRDLTYV YRHPDGTPRW FEISGRPHFS PEGDFLGYHG VGSDVTEQHR
TRCALVEAHA ELSEQNRRFD AALENMTHGL CMFDAEQRLV VWNRRYLGIF GLPDDAVHVG
MGQRAIIEML VARGCYKRGA TVDAISEGTR TSLSGDGSKS VLRELADGRV IAVIHRPMAD
GGGWVATFED ITERRRNEAR IIHMARHDGL TDLPNRTHLR EVGAEWLAAL RTAAEAPLAV
LCLDLDRFKP VNDSFGHAVG DALLRAVADR LRGHVRSHDV VARLGGDEFA VLSRVEDAAA
AATLAERLIE TVAAPYTLDG ITVEIGMSAG IALAEGDVPH DIERLLKEAD LALYEAKTEG
RGTVRLFEPQ MDETLRERLG LERELREALA QDRFELHYQP LVDLSDNRIT GMEALIRWHH
PERGLVSPAV FIPLAEETGL IVPIGEWVLR QACRDAVDWP GEISVAVNVS PLQLRHRGFI
QSVLGALAAS GLKASRLELE ITENVLLDDT EANLETLHTL RKLGVRISMD DFGTGYSSIS
YLRRFPFDKI KIDRSFVRDC AAESEAGAII RAIVSLGASL GITTLVEGVE TEPQLATIRA
EGAQEVQGYL FSPPRPVHEI AVLLEAGTTA EGRPGRTLAA
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