Gene Mext_3858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3858 
Symbol 
ID5833708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4286036 
End bp4286773 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content67% 
IMG OID641369648 
ProductNADP oxidoreductase coenzyme F420-dependent 
Protein accessionYP_001641301 
Protein GI163853258 
COG category[R] General function prediction only 
COG ID[COG2085] Predicted dinucleotide-binding enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0710009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTCTG ATTGTTTTGG GATTTTTTCC GTTCGGCGTG GGGTGCTGGC TCTGCTGGCC 
GGCATTCTTC TGCTTCCTGC CCTGCCCGCT TTCGCGCAGT CCGAAACGAC AAAAAGAATC
GGGATCATCG GGGCGGGCAA TATCGGCGGT ACGCTCGGCC GGCTCTGGAT CAAGGCGGGC
TACGAGGTGT TCTTCGCCTC CCGCCACCCG GAGGAGCTGA AGCCGCTGGT GGAAGAACTC
GGGCCCAAGG CGCGGGCCGG CACGCCGGCG GAGGCGATCG CCTTCGGCAA CGCCGTGCTG
ATCGCAGTGC CCTACAAGGC CTATCCGGAG CTGGGGCGTG AGAACGCCGC GGCGCTGAAG
AACAAGGTCG TGATCGATGC CGGCAACGCG GTGAAGGCCC GCGACGGGGC CGTCGCCGAC
GAGGTCGAGC GCGACGGCAT CGGTGCGGTC TCGGCCAAGT ATCTGGCCGG CGCCCACGTG
GTGCGCGCCT TCAATGCGGC CAACTACAAG ATCTTCCAGA AGAATGCCGG CCGGCCCGAG
CCGCGCATGG CGGTGCCGAT CGCCGGCAAC GACCCGAAGG CGCTGGAGAC CGCCCGCACC
CTGGTCTCGG ATGCCGGCTT CGACCCCGTG GTGGTCGGCG AGCTGAAGGC GGCCGATACC
TTCGCCATGG GCTCGCCCGG CTTCGGCCAT GACCTCTCGG CGCCGGAGCT GAAGCAGAAG
CTCGGGGTGA AGCCTTGA
 
Protein sequence
MRSDCFGIFS VRRGVLALLA GILLLPALPA FAQSETTKRI GIIGAGNIGG TLGRLWIKAG 
YEVFFASRHP EELKPLVEEL GPKARAGTPA EAIAFGNAVL IAVPYKAYPE LGRENAAALK
NKVVIDAGNA VKARDGAVAD EVERDGIGAV SAKYLAGAHV VRAFNAANYK IFQKNAGRPE
PRMAVPIAGN DPKALETART LVSDAGFDPV VVGELKAADT FAMGSPGFGH DLSAPELKQK
LGVKP