| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3843 |
|---|
| Symbol | |
|---|
| ID | 5833473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 4271063 |
|---|
| End bp | 4272112 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641369633 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_001641286 |
|---|
| Protein GI | 163853243 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.19753 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGG CCGCGGGCGC CGCTCAGGCC CGCCCCGTAC GGCGCCGCCT CCTGCCGCTG
GCGGTCCTGG CCCCGGTCGC GCTGATCCTC CTCGTCCTGG TTTCGCTCGG CATCGGCCGC
TACCCCGTGC CGCTCGTCGA CGTGTTCGGG GTGCTCGTTG CCAAGCTGTT CGGCCAAGCG
CCCGCCCTCG ATCCCGCCGC GCAGACCGTG GTGCTGAACG TGCGCCTGCC GCGGGTGTTC
GGGGCGCTCG TGGTCGGGGC CGGGCTCGCG GCGGCGGGGG CGACCTATCA GGGGCTGTTT
CGCAATCCCC TCGTCTCGCC GGACATCCTC GGGGTTTCGG CGGGCGCGAG CCTCGGCGCG
GTACTCGGCA TCGTGCTCGC CCTGCCGGTG GCGGCGATCC AGGGGCTCGC CTTCGCCGGA
GGGCTCGCCG CGGTCGGCGC CGTCTACGCC GTCGGGTTGG CGGTGCGCCG GCACGATCCG
GTGCTGACGC TGGTGCTCGC GGGCGTCGCC GTGGGGGCGC TGCTCGGGGC CGGGATCTCG
CTGCTCAAGG TGCTCGCCGA CCCCTACAAC CAACTCCCCG CCATCACCTT CTGGCTGCTC
GGCAGCCTCG CCTCGGTCAC TGCGGGCGAC ATCGCCGCGA TCCTGCCGGC AATGGCTCTC
GGCCTCGCTC CCCTGGTGCT GCTGCGCTGG CGCGTGAACC TGATGAGCCT CGGCGACGAG
GAGGCCCGCG CGCTGGGCGT CGAGACGCGC CGGCTCCGCC CGCTCCTGGT GGCGGGCGCG
ACGCTGGTGA CCGCCGCCGT GGTCTCGGTG ACGGGGGTCA TCGGCTGGAT CGGGCTGATC
GTGCCGCACG TCGCCCGCCT GCTGGTCGGG CCGGATTTCC GCCGCCTGCT GCCGGCCTCG
ATGCTGCTCG GAGCGGGCTA CCTCACCGCG GTCGATCTCC TGGCCCGCAC GGTGGCCACC
ATCGAGGTGC CGCTCGGCAT CCTCACGGCG CTCGTCGGCG CGCCGTTCTT CCTCTGGCTG
CTGGCTGCGG GAAAGCGGGG CTGGGCATGA
|
|---|
| Protein sequence | MSEAAGAAQA RPVRRRLLPL AVLAPVALIL LVLVSLGIGR YPVPLVDVFG VLVAKLFGQA
PALDPAAQTV VLNVRLPRVF GALVVGAGLA AAGATYQGLF RNPLVSPDIL GVSAGASLGA
VLGIVLALPV AAIQGLAFAG GLAAVGAVYA VGLAVRRHDP VLTLVLAGVA VGALLGAGIS
LLKVLADPYN QLPAITFWLL GSLASVTAGD IAAILPAMAL GLAPLVLLRW RVNLMSLGDE
EARALGVETR RLRPLLVAGA TLVTAAVVSV TGVIGWIGLI VPHVARLLVG PDFRRLLPAS
MLLGAGYLTA VDLLARTVAT IEVPLGILTA LVGAPFFLWL LAAGKRGWA
|
|---|
| |