| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3827 |
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| Symbol | |
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| ID | 5835277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4250263 |
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| End bp | 4251753 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641369618 |
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| Product | protease Do |
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| Protein accession | YP_001641271 |
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| Protein GI | 163853228 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGA CTGTCTGCCG CCGCCCCATC GCCTCCGTCG CCGCAGCCGC GCTCGTCGCA
GGCGGCGCGG CTGGGTTCGG CTTGGCCGAG CCCATGACCC CGGCTTACGC CCAGGCCCTG
CCCAAGACCC CGATCGAGGC GCCCGATCAG CCGCCAGGCT CGTTCGCCAA CGTCGTCGAC
AAGGTGAAGC CGGGCGTCGT CGCCGTGAAG GTGAAGCTCG ACGACAGCGC CGACGATGAC
GACGACAGCC CCGGCGGCCC GAACATGCAG CAGGTGCCGC CGCAGCTGCG CGAATTCTTC
AAGCGCTTCG GCCAGGGTGG GCCAGGCGGT CGCGGCATGC GGCCGCGGGG CGGGGTCGGC
TCCGGCTTCA TCATCTCGGC GGACGGCTAC GTCGTCACCA ACAACCACGT CGTCGACAAG
GCCAAGACCG TGCAGGTCAC GCTGGACGAC GGCCGCACCC TCGACGCCAA GGTGATCGGC
AAGGACTCCA AGACCGACAT CGCCCTCCTG AAGATCACCG AGAGCGGCAG CTATCCCTAT
GTCCAGTTCG GCAAGGGCGC GCCCCGCGTC GGCGACTGGG TCTTGGCCAT CGGCAACCCG
TTCGGCCTCG GCGGTACGGT GACGGTGGGC ATCGTCTCGG CCCGCGGTCG CGACATCGGC
GCCGGCCCCT ACGACGATTT CCTGCAGATC GACGCGCCGA TCAACAAAGG CAATTCCGGC
GGCCCGACCT TCAACGTCAA CGGTGAGGTC GTAGGCGTGA ACACGGCGAT CGCCTCGCCG
TCCGGTGGCT CGGTCGGCCT CGGCTTCGCG ATCCCCGCCG AGACGGTGCA GACGGTGGTC
GATCAGCTCC GCACCGACGG CAAGGTGGTG CGTGGTTATC TCGGCGTGCA GGTCCAGCCG
GTGACGAAGG ACATCGCCGA GGGGCTCGGC CTCGACAAGG CCAAGGGCGC GCTCGTCAAT
GACGCCGAGA GCGGCACGCC GGCGGCCAAG GCCGGCCTGA AATCGGGCGA CGTGATCGAG
TCGGTCAACG GCGTGCCCGT GAACAACGCT CGCGATCTGT CGCGGCTGAT CGCCGGCCTC
AAGCCCGGCA CCGAGGTGAA GCTCGCCTAT CTGCGGGGCG GCAAAAGCGA GGTGGCCACC
GTCGAACTCG GTACGTTACC GGGCGACAGC AAGGTGGCGC GGCGCGGCGA CGAAGCGCCG
AGCGGTCAGG CCCGGCTCGG CCTGAGCCTG GCCCCTGCCA GCGAGATCGG CCTCGGCGAC
GAGGGCGTGG CGGTGATGGA TGTCGATCCC GACGGTCCGG CCGCGGCCAG GGGCATCTCC
CAGGGCGACG TGATCCTGGA TGTCGCCGGC ACCAGCGTCT CGAAGCCCTC CGAGGTGCAG
GCACAGATCC GTGCAGCCGA ATCGAGCGGC CGCAAGGCGG TGCTGATGCG GGTGAAGAGC
GCCAGGGGGC AGACCCGCTT CATCGCCGTC CCCCTGACCA AGGAGGGCTG A
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| Protein sequence | MPLTVCRRPI ASVAAAALVA GGAAGFGLAE PMTPAYAQAL PKTPIEAPDQ PPGSFANVVD
KVKPGVVAVK VKLDDSADDD DDSPGGPNMQ QVPPQLREFF KRFGQGGPGG RGMRPRGGVG
SGFIISADGY VVTNNHVVDK AKTVQVTLDD GRTLDAKVIG KDSKTDIALL KITESGSYPY
VQFGKGAPRV GDWVLAIGNP FGLGGTVTVG IVSARGRDIG AGPYDDFLQI DAPINKGNSG
GPTFNVNGEV VGVNTAIASP SGGSVGLGFA IPAETVQTVV DQLRTDGKVV RGYLGVQVQP
VTKDIAEGLG LDKAKGALVN DAESGTPAAK AGLKSGDVIE SVNGVPVNNA RDLSRLIAGL
KPGTEVKLAY LRGGKSEVAT VELGTLPGDS KVARRGDEAP SGQARLGLSL APASEIGLGD
EGVAVMDVDP DGPAAARGIS QGDVILDVAG TSVSKPSEVQ AQIRAAESSG RKAVLMRVKS
ARGQTRFIAV PLTKEG
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