| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3803 |
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| Symbol | |
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| ID | 5834730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4222153 |
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| End bp | 4223622 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641369595 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001641248 |
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| Protein GI | 163853205 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0126112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGTGG AGCGGCACAT GTCGGACAAT CAGCGCGAGG CACTTCGCCA AAATGCGTTG
GCCGAGATCG CCCTCCTCGA CACGCCACCC GAGCGCGAGT TCGATACACT CGCGAAGCTT
GCACAACGCA TGCTTGGCAC CGGCATGTCT TCGATCACCC TGATTGCTCC GGAGCGCCAA
TGGTTCAAGG CACGCTGCGG TCCCCTGGCA CCGGAGACGA CGCGGGCTCA GGCGTTCTGC
CCGGTCGTGG TCGAGACCGA GGCGCCGCTC ACCGTAGCGG ACGCTCGCCT CGACCCTCGC
TTCGCCGAAA GCCCATTTGT CACAGGCTCA CCGTATATCC GCTATTACGC GGGCGTCCCG
TTGCGGGTCC GGCGGCCAGA CAGCGGCCAC GTTACGATCG GCACGCTCTG CGTCCTTGAC
GAGCGGCCGC GCGAGCCGAC CTCAACCGAC TTGGAGGTTC TAGAAGAGTT GGCCTGCGTC
GCCGAAGCCT TGATTGAGGC CCGGGCCGTC GCTCTCCGTG CTGCCAAGGC TGCCGAAGAG
CACCGTCGAG CCGTAGAGCG GCTGGAGCGC GAACGCCGCC AGTTCAAGCA GGCGGAGCGC
ATGGCCGACA TGGGATCGTA CCGATACGAC ATCGAGAAGC AGTTCACCCT CTGGTCGGAC
GGTGTCTTCG CCATCCACGA ACGGCCCGTC AGCGCCGGTG TGCCGAACGG CGAGATCATG
AACTATTTCC CCGAGCCCGA TCGCTCCCTA TTCGTCGCCG CGGTCAGGCG CACGCTGGAC
ACGGGCGAGC CGTTCGAGAT GGACGGCGAC TTCATAACCG CCAAAGGCAA CGCGCGGCGC
GTGCGGTACT CCTGCGAGAT CGAGTTGGCC AAGGGCAAAC CCGTTGCCCT CATCGGTCTG
ATCCAAGACA TCACCGAACG GCACGGCTTG GAGCAGCGCC TGCGCCACCT CGCTTGCACC
GACGACCTGA CCCAGCTGGC CAACCGGGCC GAGTTTCACC GTGTTCTCGA TGGACGGCTG
CACGAGGCGC GCGCTGCGGA CGACGACGTG GCCGTGCTTC TGATCGACCT CGACGGCTTC
AAAGGCGTCA ACGACGTCCT CGGCCATGCA GCAGGCGACG CGGTGTTGCG CGGTGTCGCC
GATCGGTTGC GCGCTTTCTG CGATGACGGT TGTCTCCCAG CTCGGCTAGG GGGCGACGAG
TTCGCGGTCG TGATGCCGGC CGGTCTCGAT CGCGTAGGAC TTGATCGGAA GGTGCGGCGC
CTCCTGCACG AACTTGAGAT CGTCATGCAC GGACATGGCC ACATCGCCCG TGTGACGGGA
ACAATCGGTA TCGCGTGGTC GAGCGCGGCC GCGCAGAACC GCGACGTCCT CCTTCGTCAG
GCCGATGCGG CGCTCTACGC CGCCAAGCGC ACCCGGAAGG GAACGGCCCA GACCTATCAA
GCCGGCGCGG ACCACCGGAT GGCTGGCTGA
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| Protein sequence | MGVERHMSDN QREALRQNAL AEIALLDTPP EREFDTLAKL AQRMLGTGMS SITLIAPERQ
WFKARCGPLA PETTRAQAFC PVVVETEAPL TVADARLDPR FAESPFVTGS PYIRYYAGVP
LRVRRPDSGH VTIGTLCVLD ERPREPTSTD LEVLEELACV AEALIEARAV ALRAAKAAEE
HRRAVERLER ERRQFKQAER MADMGSYRYD IEKQFTLWSD GVFAIHERPV SAGVPNGEIM
NYFPEPDRSL FVAAVRRTLD TGEPFEMDGD FITAKGNARR VRYSCEIELA KGKPVALIGL
IQDITERHGL EQRLRHLACT DDLTQLANRA EFHRVLDGRL HEARAADDDV AVLLIDLDGF
KGVNDVLGHA AGDAVLRGVA DRLRAFCDDG CLPARLGGDE FAVVMPAGLD RVGLDRKVRR
LLHELEIVMH GHGHIARVTG TIGIAWSSAA AQNRDVLLRQ ADAALYAAKR TRKGTAQTYQ
AGADHRMAG
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