Gene Mext_3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3797 
Symbol 
ID5833914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4213821 
End bp4214363 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content68% 
IMG OID641369589 
Productregulatory protein TetR 
Protein accessionYP_001641242 
Protein GI163853199 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.350305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGAG TTTCGCAGGA GCAAGCCAAG CTCAACCGCC AACGAGTCGT GGAGGTCGCA 
TCCTCCCTGT TCCGGGAGCG CGGCCTGAAC GGCATCGGCG TCGTGGACAT TATGGCAGCC
GCCGGCCTGA CTCATGGCGG CTTCTACGGC CAGTTCGCCA ACAAGGATGC CCTCGCGGCC
GAGGCGTTCG ACGCCGCGAT CGGCAACGAG TACCGGGCGA ACCTCGACAC CTTCATCGAG
AACTATCTCT CCCTCGGGCA CGTCCGGACA CCTGGGAGAG GCTGCCCCGT CGCGGCCCTG
GTGAACGATA TCGGGCGCGA GCCTGCCGGA AGTGCCCTGC GGTCGCGGTT CACCCACGCG
GTCAAGGGGC TCGCCGGCCT CATCGCGGAC AGACTGCCTA AGAGCGCGAA GGAGCGTCGT
AGGCAGCGGT CGCTCGTGGC GCTGTCGACC ATGGTCGGGG CCGTGGTGCT GGCGCGGGGC
GTCGACGACG AGGCGCTGGC TGACGAACTC CTCCAGGCAG CGCGCTCGAC CATCACCCCC
TGA
 
Protein sequence
MPRVSQEQAK LNRQRVVEVA SSLFRERGLN GIGVVDIMAA AGLTHGGFYG QFANKDALAA 
EAFDAAIGNE YRANLDTFIE NYLSLGHVRT PGRGCPVAAL VNDIGREPAG SALRSRFTHA
VKGLAGLIAD RLPKSAKERR RQRSLVALST MVGAVVLARG VDDEALADEL LQAARSTITP