Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3797 |
Symbol | |
ID | 5833914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4213821 |
End bp | 4214363 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641369589 |
Product | regulatory protein TetR |
Protein accession | YP_001641242 |
Protein GI | 163853199 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.350305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGAG TTTCGCAGGA GCAAGCCAAG CTCAACCGCC AACGAGTCGT GGAGGTCGCA TCCTCCCTGT TCCGGGAGCG CGGCCTGAAC GGCATCGGCG TCGTGGACAT TATGGCAGCC GCCGGCCTGA CTCATGGCGG CTTCTACGGC CAGTTCGCCA ACAAGGATGC CCTCGCGGCC GAGGCGTTCG ACGCCGCGAT CGGCAACGAG TACCGGGCGA ACCTCGACAC CTTCATCGAG AACTATCTCT CCCTCGGGCA CGTCCGGACA CCTGGGAGAG GCTGCCCCGT CGCGGCCCTG GTGAACGATA TCGGGCGCGA GCCTGCCGGA AGTGCCCTGC GGTCGCGGTT CACCCACGCG GTCAAGGGGC TCGCCGGCCT CATCGCGGAC AGACTGCCTA AGAGCGCGAA GGAGCGTCGT AGGCAGCGGT CGCTCGTGGC GCTGTCGACC ATGGTCGGGG CCGTGGTGCT GGCGCGGGGC GTCGACGACG AGGCGCTGGC TGACGAACTC CTCCAGGCAG CGCGCTCGAC CATCACCCCC TGA
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Protein sequence | MPRVSQEQAK LNRQRVVEVA SSLFRERGLN GIGVVDIMAA AGLTHGGFYG QFANKDALAA EAFDAAIGNE YRANLDTFIE NYLSLGHVRT PGRGCPVAAL VNDIGREPAG SALRSRFTHA VKGLAGLIAD RLPKSAKERR RQRSLVALST MVGAVVLARG VDDEALADEL LQAARSTITP
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