Gene Mext_3759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3759 
Symbol 
ID5833367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4169246 
End bp4169788 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content69% 
IMG OID641369549 
Productsigma-70 family RNA polymerase sigma factor 
Protein accessionYP_001641204 
Protein GI163853161 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.512296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.170794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGACG GGACCGACCT CATAGCGGGA GGGGCGGCGG GGGTGTCGAT CGATGCCCTC 
TACCGTCACG AGGGGCTGAA GCTCCGGCGT TTCCTCCAGC GCCTGCTCGA CAACCCGGCC
GACGCCGCGG ATGCGAGCCA GGAAACCTAC CTGCGCATGG TCGCCGCGCT CTCGCGCACG
AGCATCGAGC ACCCCTCGGC CCTGCTGTTC CGCATCGCCA CCAACGTCGC CCTGCGGATG
CGCAACCGCG GCCGGCTGGA GCGGATTCTG TTCGCGGCGA AATGCGAGGC GGAACTCGCC
GAGATCGCCG ACGGCTACGC CCTCCCGGAG CGGCAGACGA TCGCCCGCCA GGAGCTGAAG
CGGCTTGCCG CGGCGATCGA CGCCTTGCCG CCCCGCTGCC GCGAAGTGTT CCTGCTCAGC
CGCCTCGACG GCCTCGCGAA CGGCGAGATC GCGCAACGCC TCGGCATCTC GCGCAACATG
GTCGAGAAGC ACATCATCAA GGCCCTGCTG CATTGCCGGC GCAGCCGCCT CGATCTTTTT
TGA
 
Protein sequence
MGDGTDLIAG GAAGVSIDAL YRHEGLKLRR FLQRLLDNPA DAADASQETY LRMVAALSRT 
SIEHPSALLF RIATNVALRM RNRGRLERIL FAAKCEAELA EIADGYALPE RQTIARQELK
RLAAAIDALP PRCREVFLLS RLDGLANGEI AQRLGISRNM VEKHIIKALL HCRRSRLDLF