Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3759 |
Symbol | |
ID | 5833367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4169246 |
End bp | 4169788 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641369549 |
Product | sigma-70 family RNA polymerase sigma factor |
Protein accession | YP_001641204 |
Protein GI | 163853161 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.512296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.170794 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGACG GGACCGACCT CATAGCGGGA GGGGCGGCGG GGGTGTCGAT CGATGCCCTC TACCGTCACG AGGGGCTGAA GCTCCGGCGT TTCCTCCAGC GCCTGCTCGA CAACCCGGCC GACGCCGCGG ATGCGAGCCA GGAAACCTAC CTGCGCATGG TCGCCGCGCT CTCGCGCACG AGCATCGAGC ACCCCTCGGC CCTGCTGTTC CGCATCGCCA CCAACGTCGC CCTGCGGATG CGCAACCGCG GCCGGCTGGA GCGGATTCTG TTCGCGGCGA AATGCGAGGC GGAACTCGCC GAGATCGCCG ACGGCTACGC CCTCCCGGAG CGGCAGACGA TCGCCCGCCA GGAGCTGAAG CGGCTTGCCG CGGCGATCGA CGCCTTGCCG CCCCGCTGCC GCGAAGTGTT CCTGCTCAGC CGCCTCGACG GCCTCGCGAA CGGCGAGATC GCGCAACGCC TCGGCATCTC GCGCAACATG GTCGAGAAGC ACATCATCAA GGCCCTGCTG CATTGCCGGC GCAGCCGCCT CGATCTTTTT TGA
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Protein sequence | MGDGTDLIAG GAAGVSIDAL YRHEGLKLRR FLQRLLDNPA DAADASQETY LRMVAALSRT SIEHPSALLF RIATNVALRM RNRGRLERIL FAAKCEAELA EIADGYALPE RQTIARQELK RLAAAIDALP PRCREVFLLS RLDGLANGEI AQRLGISRNM VEKHIIKALL HCRRSRLDLF
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