Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3739 |
Symbol | |
ID | 5832222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4143120 |
End bp | 4143710 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641369529 |
Product | sarcosine oxidase gamma subunit |
Protein accession | YP_001641184 |
Protein GI | 163853141 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4583] Sarcosine oxidase gamma subunit |
TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.319491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.115073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAGA CCCGCTACCG CGCCGCCCGC GCCCTGCCGC TCGGCGCTCT GTCCCGCTCA GCCCCCGCTA GTTCGGGCGT CTCGGTCCGG CCCGCGGGCG CCGAGGCGCG CTTCTCCCTG CGGGCGCGGC TCGCCGCCGG CGCCGCCCCG AAGGTGGCGG GGCTCGCGCT CGATGCGCCG ATCAACACGG TCGGCACCGA CGGTGAGGTC TGGCTCGCCC GCCTCGGGCC CGACGAGTGG CTCGTCGGCG GCCCGGAGGC CGATGCCGAC CTGCTCCAGG GCCGCATCCA CGAGGCGCTC GCCGGGCTGC CCCACTCGCT GGTCGACGTC TCGCACCGCA ATGTCGGCAT CGACGTGTCG GGCCGGCAGG CCGCGGCGGT ACTCAATGCC GGTTGCCCGC TCGACCTGTC CGAGGCCGCC TTCCCGCCGG GCAGCGCCAC CCGCACCCTG CTCGGCAAGT CCGAGATCGT GCTGATCCGC GCCACCGCCG CACCGCTCTA CCGCGTCGAG TGCTGGCGCT CGTTCTCGAC CTACGTTCAC GGCTTCCTCA ATGAGGCCGT CTTCGGGGTC GAAGAGTCCG CCGCGCATTG A
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Protein sequence | MLETRYRAAR ALPLGALSRS APASSGVSVR PAGAEARFSL RARLAAGAAP KVAGLALDAP INTVGTDGEV WLARLGPDEW LVGGPEADAD LLQGRIHEAL AGLPHSLVDV SHRNVGIDVS GRQAAAVLNA GCPLDLSEAA FPPGSATRTL LGKSEIVLIR ATAAPLYRVE CWRSFSTYVH GFLNEAVFGV EESAAH
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