| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3738 |
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| Symbol | |
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| ID | 5832221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4140140 |
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| End bp | 4143127 |
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| Gene Length | 2988 bp |
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| Protein Length | 995 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641369528 |
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| Product | sarcosine oxidase alpha subunit family protein |
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| Protein accession | YP_001641183 |
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| Protein GI | 163853140 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.161816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.187034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGC CGTTCAGATT GTCCCGCGGC GGACGCATCG ACCGCACCCG CCCCATCGTC
TTCGAATTCA ACGGCAAGCC GGTCCACGGA TTCGCCGGCG ACACCGTCGC CTCGGCGCTG
CTGGCCAACG GCATCCACCT CGTCGGGCGC TCGTTCAAGT ACCACCGCCC CCGCGGCATC
CTGAGCCATG GCCCCGACGA GCCGAGCGCG CTGCTCTCGG TCGATCGTGG GCCCGGCCGG
ATCGACCCGA ACAACCGCGC CTCCGTGGTC GAGGCGCGCT CGGGCCTGCG CACGACCTCG
CAGAACCATT GGCCGTCGCT CGAATTCGAC GTCGGCGCCG TCAATGATTT GCTGTCGCCG
GTCTTCGTGG CGGGCTTCTA CTACAAGACT TTCATGTGGC CCCGGAAGTT CTGGGACCGG
GTCTATGAGC CGTTCATCCG CGCCGCCGCC GGTCTCGGAA AGGCGCCGAC GGTGGCCGAT
CCCGACCGCT ACGCCAACCG CCACGCCCAT TGCGATGTGC TGATCGTCGG CGCCGGCCCG
GCGGGGCTTG CTGCGGCGCT CGCCGCGGCG CGTACCGGCA AGCGGGTGAT CCTCGCCGAC
GAGGGCGCGG AGCCCGGCGG CACGCTCCTG CACGACACGA CCTCGCAGAT CGACGGTCGC
CCGGCGGCGG ACTGGCTCGC CGAAACGCTG GCCGAGCTCG ATGCCCGCGA GAACGTCATC
CTGCTGCCCC GCACCACCGC CTTCGGCTAT TACAACCACA ACCACGTGGC GATGACCGAG
CGCGTCACCG ACCACCTGTC GTCCGCCGCG GGCCAAGCGC CCCGCGAGCG CCTGTGGCAG
GTGCGGGCGG AGCAGGTCGT GCTCGCCGGT GGCTCCCACG AGCGCCCCCT CGTTTTCGCC
GACAACGACC GGCCGGGCAT CCTGCTCGCC GAGAGCGTGC GGGTCTTCCT CAACCGTTAC
GGCGTGGCGC CGGGCCGCAA GCTCGTCTTC GCCACGAGCG GCGCCTCCGC CTACCAAGCC
GCGCTCGATG CGCGTGCGGC GGGCCTCGAC GTCACCCTCG TCGATCTGCG CCTAGAAGCG
GATTGCGGAC CGGAGTTGGC ACGCCTGCGC AGCGCCGGGG TCGACGTATT GACCGGCCAC
ACCGTGGTCG GATCGAAGGG CCGGAAGCGC GTCACGGGTC TCATCGTGGC GCCTGTCGGG
AGCGACGGCC GGTGCGGCGG CCGTCGCATT CTCCCTTGCG ACTGCGTCGG CATGTCCGGC
GGCTGGACGC CCGCCGTCCA CCTGTTCTCG CAGTCCCGCG GCAAGCTCGC CTACGATGAG
GGCATCGATG CCTTCGTGCC GAGCCGCTCG GCGCAAGACG AGCGCTCGGC GGGCGCGGCC
CGCGGCAGCT ACGACCTCGC CGCCTGCCTC GCGGAGGGCT TCGCCGCCGG TGCCGCCGCG
GCTGGTTCCG ACGCACGGCA GGACTTCAGG GCGACGGAGA CGCTGACCGG TTTCCAGCCG
GTGCGGATCA TGCCCACCGA CGCGAACCCG ACCAAGGTCC GCGCCTTCGT CGACTACCAG
AACGACGTCA CCGCCAAGGA CATCAAGCTC GCGGTGCGCG AGGGCTTCCA GTCGATCGAG
CACGTCAAGC GCTACACCAC GACCGGCATG GCGACCGACC AGGGCAAGAC CTCGAACATG
AACGCGCTCG GCATCGTCGC CGGGCAGCTC GACAAGGCGC TGCCCGCCGT CGGCACCACG
ACCTTCCGGC CGCCCTACAC CCCGGTGACC TTCGGCGCGC TGGTGGGCCC GGCCCGCCAC
GCCCTGTTCG ATCCGATCCG CACCACTCCG ATCCACGAAT GGGCCGAGGC CCACGGCGCC
CTGTTCGAGA ACGTCGCCCT GTGGCGGCGC GCCTGGTACT TCCCGAAGGC GGGCGAGGAT
CTGCACGCCG CGGTCGCCCG CGAGTGCAAG GCGGTGCGCG AGGGCGTCGG CATCTTCGAC
GCCTCGACGC TGGGCAAAAT CGAGATCGTC GGCCGGGATG CGGCCGAGTT CATGAACCGC
CTCTACATCA ACCCCTGGAC CAAGCTCGCC CCCGGGCGCT GCCGCTACGG GCTGATGCTG
AAGGAGGACG GCTACATCCT CGATGACGGC GTCGTCGCCC GCGTGTCGGA CACCTGCTTC
CACGTCACCA CCACCACCGG CGGCGCCGCC CGCGTGCTCG GCCACATGGA GGATTATCTC
CAGACCGAGT GGCCGGAGCT TGAAGTGTTC CTGACCTCGA CCACCGAGCA ATGGGCGGTG
ATCGCGCTCC AGGGCCCGAA GGCCCGCGCC GTGATCGCGC CGCTCGTCGA CGGCATCGAT
CTGTCGCCGG ACGCCTTCCC GCATATGGCG ATGCGCTCAG GCACGATCTG CGGCGTGCCG
ACCCGGCTGT TCCGGGTGTC GTTCACCGGT GAACTCGGCT TCGAGATCAA CGTGCCCGCC
GACCACGCCC GCGCGGTCTG GGAGGCGGTG TTCGAGGCGG GCCGGGCCCA CGGCATCACG
CCCTACGGCA CCGAGACGAT GCACGTGCTG CGCGCCGAGA AGGGCTACAT CATCGTCGGC
CAGGAGACCG ACGGCACGGT GACCCCGGAC GATGTCGGCA TGGCCGGCAT GATCCCGAAG
GCCAAGGGAG ACTTCGTCGG CAAGCGCTCG CTGGCGCGCC CCGACGTCGT TGCCACCGGC
CGCAAGCAGC TCGTCGGCCT CATGACCGAT GACCCTAAGC TCGTCCTCGA CGAGGGCGCG
CAGATCGTCA CGGATACCCA TCAGCCGATC CCGATGCGCA TGCTCGGCCA CGTCACGTCG
AGCTACTGGA GCGCCAATTG CGGCCGCTCC ATCGCGCTGG CCCTGGTCGA GGGCGGACGC
GAGCGGATGA ACGGCCATCT CTTCGTCACC ACGCCGGACG GGTTCACCCG CGTCACCGTC
TGCGAGCCGG TCTTCTTCGA CGTCCAGGGG GAGCGCATCA ATGCTTGA
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| Protein sequence | MAQPFRLSRG GRIDRTRPIV FEFNGKPVHG FAGDTVASAL LANGIHLVGR SFKYHRPRGI
LSHGPDEPSA LLSVDRGPGR IDPNNRASVV EARSGLRTTS QNHWPSLEFD VGAVNDLLSP
VFVAGFYYKT FMWPRKFWDR VYEPFIRAAA GLGKAPTVAD PDRYANRHAH CDVLIVGAGP
AGLAAALAAA RTGKRVILAD EGAEPGGTLL HDTTSQIDGR PAADWLAETL AELDARENVI
LLPRTTAFGY YNHNHVAMTE RVTDHLSSAA GQAPRERLWQ VRAEQVVLAG GSHERPLVFA
DNDRPGILLA ESVRVFLNRY GVAPGRKLVF ATSGASAYQA ALDARAAGLD VTLVDLRLEA
DCGPELARLR SAGVDVLTGH TVVGSKGRKR VTGLIVAPVG SDGRCGGRRI LPCDCVGMSG
GWTPAVHLFS QSRGKLAYDE GIDAFVPSRS AQDERSAGAA RGSYDLAACL AEGFAAGAAA
AGSDARQDFR ATETLTGFQP VRIMPTDANP TKVRAFVDYQ NDVTAKDIKL AVREGFQSIE
HVKRYTTTGM ATDQGKTSNM NALGIVAGQL DKALPAVGTT TFRPPYTPVT FGALVGPARH
ALFDPIRTTP IHEWAEAHGA LFENVALWRR AWYFPKAGED LHAAVARECK AVREGVGIFD
ASTLGKIEIV GRDAAEFMNR LYINPWTKLA PGRCRYGLML KEDGYILDDG VVARVSDTCF
HVTTTTGGAA RVLGHMEDYL QTEWPELEVF LTSTTEQWAV IALQGPKARA VIAPLVDGID
LSPDAFPHMA MRSGTICGVP TRLFRVSFTG ELGFEINVPA DHARAVWEAV FEAGRAHGIT
PYGTETMHVL RAEKGYIIVG QETDGTVTPD DVGMAGMIPK AKGDFVGKRS LARPDVVATG
RKQLVGLMTD DPKLVLDEGA QIVTDTHQPI PMRMLGHVTS SYWSANCGRS IALALVEGGR
ERMNGHLFVT TPDGFTRVTV CEPVFFDVQG ERINA
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