Gene Mext_3692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3692 
Symbol 
ID5831602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4087136 
End bp4088026 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content73% 
IMG OID641369484 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_001641139 
Protein GI163853096 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCC TGATCCTCGG CGGCGCCGGT CAGGTCGGCA CGGAGCTTCA AGCCTTGTCC 
TGGCCCGAGG GCGTGCGGGT CCACGCGCCC GACCGCCAGA GCCTCGACAT CACCGACGAG
GCGACTGTGG CCGCGGCGCT CGATGCGCGC ACCTATGCGG CGGTGATCAA CACGGCCGCC
TACACCGCCG TCGATAAGGC CGAGAGCGAG GTCGCGGCCG CATGGCGCCT CAACGCGCTG
GCCCCGGCCA TCCTCGCGGC CGAGACGAAG CGGCGGGCCA TCCCGCTCGT CCACGTCTCG
ACCGACTACG TGTTCGATGG GTCGGGCGAA GGCTTCTACG CCCCCGATGC GCCGGTGAAC
CCGCAGAGCG TCTACGGTGC CAGCAAGGCG GCCGGCGAGA TGGCGGTCCG CTCCGGCAAT
CCGCGCCACG CGATCGTGCG CACCGCCTGG GTGGTGAGCC CGCACCGGGG CAACTTCGTC
AAGACGATGC TGCGGCTCGC GGGCGAGCGG GATCGGCTTA CCGTTGTCGA GGACCAGCAC
GGCTGCCCGA CCTCCGCGGC CGATCTCGCG GGCGCGCTCG CCGCGATCGC CCTGCGGCTG
GCGGGCGACG AGGCCGCGCC CACCGGCAGC TTCCACTGCG TCAACGACGG CGCGACGACG
TGGTGCGACT TCGCCCGGGC GATCGTCGCG GGATCGGCCC GGCGCGGCGG ACGCTCGGTG
CCGGTCGAGG GCATCCCGAG TTCCGCCTAC CCGACGCCGG CCCGGCGCCC GGTGAACTCG
CGCCTCTCCA CCCAGAGCCT GACCGACGCC TACGGCCTCG CGCCGCGCTC CTGGGAGCCG
GCGCTCGACG ATATCCTCGA CCGGCTGGTC GGGCCGGTTC GCTCCCACTG A
 
Protein sequence
MDILILGGAG QVGTELQALS WPEGVRVHAP DRQSLDITDE ATVAAALDAR TYAAVINTAA 
YTAVDKAESE VAAAWRLNAL APAILAAETK RRAIPLVHVS TDYVFDGSGE GFYAPDAPVN
PQSVYGASKA AGEMAVRSGN PRHAIVRTAW VVSPHRGNFV KTMLRLAGER DRLTVVEDQH
GCPTSAADLA GALAAIALRL AGDEAAPTGS FHCVNDGATT WCDFARAIVA GSARRGGRSV
PVEGIPSSAY PTPARRPVNS RLSTQSLTDA YGLAPRSWEP ALDDILDRLV GPVRSH