Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3659 |
Symbol | |
ID | 5832870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4042615 |
End bp | 4045764 |
Gene Length | 3150 bp |
Protein Length | 1049 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641369452 |
Product | ribonuclease |
Protein accession | YP_001641108 |
Protein GI | 163853065 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAACA ACAAGATGCT CATCGATGCG ATGCATCCGG AGGAGACCCG GGTCGTCACA GTCCAAGGCT CGCGGGTCGA GGAATTTGAT TTCGAGGCGG CCAACCGCCG GCCTCTGAGG GGCAACATCT ATCTCGCCAA GGTCACCCGC GTGGAGCCCT CGCTCCAGGC GGCCTTCGTC GAGTACGGCG GCAACCGCCA CGGCTTCCTC GCCTTCAACG AGATCCACCC CGATTACTAC CAGATCCCGA TGGCCGACCG CCTCGCGCTG ATCGAGGCCG AGGCGCGCGA GGAAGAGGAG CACCGCGAGC GCGAGGAGCG CCGTCCGCCG CGGGGCCGCC GCTCGCGCGG GCGCCGGGCC GAGGCCCGCG GCTCGCGCCC CGACGACACG GTGAAGTCGC AAGAGGCGGT GTCCGACGCA GGCTCCGAGG ACGCTGCGAT CCCCGGTGAG GGCCAGGCCG CCGACGCGCC CGCGCCGGAG GCGATCGAGG CGGTGCGGTC CGCTCTCGTC GAAGGACGGA TCGAAGAACG GAACGACGAG CGGAGCGAGA GCGACGCGGC GTCCGCACCG GTCGAGGCCG GCGGCGATGC CTCCGCGAGC CTGCCCGAGG CGGCGCTGGA GCCCCCCACC TCCGCCAGCG AGGCGCCGGC TGACGAAGCC GCCGCGGTCG AGCCCTCCGA CATCGCCGCG ATCTCCGAGG CGCCGAACCC GCCCGTCGAA ACCACGGAAT CCTCCGAGGC TGCTCCCGCC GAGGTCGATT CCGCTGAGGC AGAGACGGTC GAGCCGCAGC CCGTCGCCGC CAGCGCGCCC GTCTCCCAGG CCGAGATCGA GGAAGCCGAC GCGGATTCGG ACGAGGACTC CGAGACCGAC GACTCGGACG ACGAGGACTC GGAGGATGAC GAGTCCGACG ACGAGGATGA GGACGACGAT TCCGAGGACG ACGATTCGGA CGACGAGGAC GACGACGAGG AATCCGAGGA CGGCGAGCCG CGCGTCGCGC AGGTCGGCGG CTCGGGCGAT GCGCTCGCCG AGCTCCCCGA GCGTCCGCGC GCCTATCGCC GCCACTACAA GATCCAGGAG GTGATCAAGC GCCGCCAGAT CATCCTCGTC CAGGTCGTCA AGGAAGAGCG CGGCACCAAG GGCGCGGCGC TCACCACCTA CCTGTCGCTG GCCGGCCGCT ACTCGGTGCT GATGCCCAAC ACCGGACGAG GCGGCGGCAT CTCGCGCAAG ATCACCTCGG CCGCCGACCG CAAGCGCCTC AAGGAAGTGG TCGCCGACCT CGACGTGCCG GATGGGATGG GGATCATCCT GCGCACGGCC GGCGCCTCGC GCACCAAGCC CGAGATCAAG CGCGACTTCG AGTACCTGAT GCGCCTGTGG GAGAGCGTGC GCGAGCTGAC GCTGTCCTCG ACCGCCCCGG CGCTCGTCTA CGAGGAGGGC TCGCTGATCA AGCGGGCGAT CCGCGACCTC TACAACAAGG ATCTCGACGA GGTTCTGGTC TCCGGCGAGG ACGCCTACCG CGAGGCCAAG GACTTCATGC GGATGCTGAT GCCCGGCCAG TCCAAGGTCG TGAAGCCCTA CCGCGATCCG ACGCCGATCT TCGCCCGCTA CGGCGTCGAG CAGCAGCTCG ACGCGATGTT CTCGACCCAC GTGGCGCTGC GCTCCGGCGG CTACCTCGTC ATCAACCCGA CCGAAGCGCT GGTCTCGATC GACGTGAACT CGGGCCGCGC GACCCGCGAG CACGACATCG AGGACACCGC GCTCAAGACG AACCTCGAGG CAGCCGAAGA GGTCGCCCGG CAGGTGCGCC TGCGCGATCT GGCCGGCCTC GTCGTGATCG ACTTCATCGA CATGGAGGAG AAGCGCAACA ACCGGGCGGT GGAGAAGCGC CTGAACGAGG CGCTCAAGAA CGACCGGGCG CGCATCCAGG TCGGGCGGAT CTCGCCCTTC GGCCTGCTTG AGATGAGCCG CCAGCGCATC CGCACCGGCG TGCTCGAATC CTCCTCGATC CCCTGCGCCC ATTGCGGCGG CTCGGGCTTC GTGCGGGCGA CCTCCTCGGT GGCGCTGCAC ATCCTGCGCT CGATCGAGGA AGTGCTGCTC AAGTCGGCGA GCCACAACGT CGTGCTGCGC ACCCGCACCG AGACGGCGCT CTACATCCTC AACCAGAAGC GGGCGCATCT CTTCGATCTC GAGCAGCGCT TCTCGGTCAC GATCACCATT TCCGCCGACG ACCGGCTCGT GGCGACCTCC GCCTTCCAGC TCGAACGCGG TGAGCCGGCG GTGAAGCACG AGGGCCCGGT GACGGGCGTG CGCGCCGTGG CGATCTCGCC GGTCTACGAG GCCGAGGAGT TCGAGGACGA GGCGGTCGAG AGCCAGGAGA CCGAAGAGGT CGAGACCGAG GTCGAAGCGG AGGCCGAGGG CGCGTCCGAG GAGCGCCCGG CCGCCGACGC GTCCGAGGAG GGCGGTGGCC GTCGCCGCCG TCGCCGTCGC CGTCGCGGTG GTCGCACCGC CGGTGAGGGC GAGGCCCGCG CGCGGGACGA GGACGGGACC GACAGCGAGG ACGGGGCCGA GGACGGCGCG GAGGACGGCG ACGATGCGCC CGATTCCGAG CCGGAGGCCG CCGAGGCGGC TCTCGGCGCC GCGGCCGACC CGGACGAGAC CGCATCGGAC GCCGACGCCA ACGGCGAGGA CGCCAACGGA CGCCGCCGTC GCCGCGGACG CCGGGGCGGT CGCGGCCGCG GCCGGACCGA GCGCAATGGC CGTTCGGATT CCGAGCAGGA TGCCGATGCG GACGAGGCCG GCGCGGTGCG GGCCGCGGAG GAGTCCGAGG CGCATCCCGA GGAGACCGCC TCCGATACCC TGCCGGTGGG CCCCGAGGAG CCGTTCAACG ATGCCGATGT GAGCACCGTC TCGCTCGCCG CCGAGAACGG CGCCGCGGCC GAGCCGCCGC CGGTCGTCCC CGCGCCGGAG CTCGAGCCGA TCCAGGTCGA GTCCTTTGCC GAGGCCGCAA CCGAGGCGGC AGCGCCCAGC CCGGCCAACG CTGAGCCCGC GCCGGAGCCC GTCGCGGTGG TGCTGACGCC GCCGGACCCG AACCGTCCCA AGCGGGCCGG CTGGTGGTCG CGCACCAAGG CGGCGCTATC GGGGGAGTGA
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Protein sequence | MANNKMLIDA MHPEETRVVT VQGSRVEEFD FEAANRRPLR GNIYLAKVTR VEPSLQAAFV EYGGNRHGFL AFNEIHPDYY QIPMADRLAL IEAEAREEEE HREREERRPP RGRRSRGRRA EARGSRPDDT VKSQEAVSDA GSEDAAIPGE GQAADAPAPE AIEAVRSALV EGRIEERNDE RSESDAASAP VEAGGDASAS LPEAALEPPT SASEAPADEA AAVEPSDIAA ISEAPNPPVE TTESSEAAPA EVDSAEAETV EPQPVAASAP VSQAEIEEAD ADSDEDSETD DSDDEDSEDD ESDDEDEDDD SEDDDSDDED DDEESEDGEP RVAQVGGSGD ALAELPERPR AYRRHYKIQE VIKRRQIILV QVVKEERGTK GAALTTYLSL AGRYSVLMPN TGRGGGISRK ITSAADRKRL KEVVADLDVP DGMGIILRTA GASRTKPEIK RDFEYLMRLW ESVRELTLSS TAPALVYEEG SLIKRAIRDL YNKDLDEVLV SGEDAYREAK DFMRMLMPGQ SKVVKPYRDP TPIFARYGVE QQLDAMFSTH VALRSGGYLV INPTEALVSI DVNSGRATRE HDIEDTALKT NLEAAEEVAR QVRLRDLAGL VVIDFIDMEE KRNNRAVEKR LNEALKNDRA RIQVGRISPF GLLEMSRQRI RTGVLESSSI PCAHCGGSGF VRATSSVALH ILRSIEEVLL KSASHNVVLR TRTETALYIL NQKRAHLFDL EQRFSVTITI SADDRLVATS AFQLERGEPA VKHEGPVTGV RAVAISPVYE AEEFEDEAVE SQETEEVETE VEAEAEGASE ERPAADASEE GGGRRRRRRR RRGGRTAGEG EARARDEDGT DSEDGAEDGA EDGDDAPDSE PEAAEAALGA AADPDETASD ADANGEDANG RRRRRGRRGG RGRGRTERNG RSDSEQDADA DEAGAVRAAE ESEAHPEETA SDTLPVGPEE PFNDADVSTV SLAAENGAAA EPPPVVPAPE LEPIQVESFA EAATEAAAPS PANAEPAPEP VAVVLTPPDP NRPKRAGWWS RTKAALSGE
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