| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3644 |
|---|
| Symbol | |
|---|
| ID | 5834071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 4023774 |
|---|
| End bp | 4024490 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641369437 |
|---|
| Product | LrgB family protein |
|---|
| Protein accession | YP_001641093 |
|---|
| Protein GI | 163853050 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1346] Putative effector of murein hydrolase |
|---|
| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCG AGTTCGCGCT CTGGGTCTAT CTCAGCCACA CGCCGCTGCT GTGGCTCACC
GTGACGCTGC TGGCCTATGC GGTGGCCGAC CGCCTGTTTC AGGCGGCCGG GCGCCACCCG
ATGGCCAACC CGGTGATCCA CGCGATCTGG ATGATCGGCC TCGTGCTGAC GCTGACCGGC
ACGCCCTACC GCGCCTATTT CGAGGGCGCG CAGTTCGTGC ACTTCCTGCT CGGCCCGGCC
ACGGTGGCGC TCGCCGTGCC GCTCTACGAG CGGCGGGCGA CGGTGATGCG CGCGCTCCTG
CCGATGCTCG CTGCCCTTCT GGTGGGCTGC GTCACGGCGA TGACCTCGGC GCTGGTTTTC
GCCAAGCTCG TCGGCATTCC CTACGATGTG CGCCTCGCCA TGGCCCCGAA ATCCGTGACC
ACGGGCGTGG CCATGGGCAT CGTCGAGGCG CTCGGCGGCG ACCCGACGCT GGCCGCCGTG
CTGGTGATGC TGACCGGCAT GGCCGGCGCG GTGATCGTCA CGCCGCTGAT GCGGACCCTG
CGCATTGAGG ACATGCGCGC CCGCGGCTTC GCGGCAGGGC TCGCCGCCCA CGGGCTCGGC
ACCGCCCGCG CCTTCCAAGT CAGCGAGGTC GCCGGCACCT TCGCCGGCAT CGCCATGGGG
CTCAACGCAT TCCTGACCGC GGTTCTCGTA CCGGTGGCGG TGAGTTTCTT GCGCTGA
|
|---|
| Protein sequence | MTGEFALWVY LSHTPLLWLT VTLLAYAVAD RLFQAAGRHP MANPVIHAIW MIGLVLTLTG
TPYRAYFEGA QFVHFLLGPA TVALAVPLYE RRATVMRALL PMLAALLVGC VTAMTSALVF
AKLVGIPYDV RLAMAPKSVT TGVAMGIVEA LGGDPTLAAV LVMLTGMAGA VIVTPLMRTL
RIEDMRARGF AAGLAAHGLG TARAFQVSEV AGTFAGIAMG LNAFLTAVLV PVAVSFLR
|
|---|
| |