Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3623 |
Symbol | |
ID | 5834155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4003707 |
End bp | 4004288 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641369416 |
Product | regulatory protein TetR |
Protein accession | YP_001641072 |
Protein GI | 163853029 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.755125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGAAG CGGCCACCGC TCTGTTCCTC GAACAAGGAT TCGGTCGCAC GACGCTCGAT CAGGTGTCGC GGCGCTCGGG GACCGGCAAG TCCGCACTCT ACGGTCGCTT CCCGGACAAG GAAGCGCTGT TCGCTGCCGT CGTCCGCCGC TCGATCCACG TCATGTTCGA TGAGCTGACC GCGAGCCCAA CCGGCGTCGG CGTCCGGGAA CGGCTGCGCC ATGTCGGGCG CGGTTTGGCG GAAAACCTCC TGGTGCCGCG CTGCATTGCC TTGATGCGGA TCACGGCAGC GGAAGCTCCG AATTTCCCGG ACCTCGCGCG AATGGCGTAC CGGGTCAGCT TCGAGGGCTC TGTGCGCTGT GTCCTCGCCG CCCTCGATCC TGCCGGCGGA GGCGAAGCGT CCCAAGACAT GATCCGAATG GCCGAGCGGT TCGTGGAGCT GGCCATCCAG CCGATCTCGT TTCAGGCGGC CTTCGGTACC GACATCGAGC CTCTCCGGCA GCGATGCGCC GACGACGTGG ACGATGCCAT CCTGCTCCTC GAAGCCAAGG GCTGGGTCAG GCGCGAACCG CCCGGAACTT AG
|
Protein sequence | MLEAATALFL EQGFGRTTLD QVSRRSGTGK SALYGRFPDK EALFAAVVRR SIHVMFDELT ASPTGVGVRE RLRHVGRGLA ENLLVPRCIA LMRITAAEAP NFPDLARMAY RVSFEGSVRC VLAALDPAGG GEASQDMIRM AERFVELAIQ PISFQAAFGT DIEPLRQRCA DDVDDAILLL EAKGWVRREP PGT
|
| |