Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3621 |
Symbol | |
ID | 5834093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4000151 |
End bp | 4000999 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641369414 |
Product | regulatory protein LysR |
Protein accession | YP_001641070 |
Protein GI | 163853027 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.248006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATC TGGCTTCGGT CCGCCTGTTC ATCCTCGCGG TGGAGTTTGG CAACCTGACG CGGGCAGCGG AGGCGGCCGG TACGGTGCAG CCGGTGGTCA GCACACGCCT CAAAGGTTTG GAAGCGGCCC TCGGTCGTAA GTTGCTGGAA CGCACGCCGC GCTTCGTCCG ACCGACAGAG GACGGCGTGG CCTTCCTCGC CAAGGCGCGT GCGCTGATGG CTGCCCACGA TAAGGCCGCG TGCTTCGACG ATGAGCCAAC AATGCGGTTC GCAATCGGGG CGAGCGATCA CGCACTGGGA ACAGGGCTGG AGCACGTCAT ACGCCACGTT CGAGCGGCAC TCCCGTCGAG GAGCGCTCTC GAACTGCGCA GCGGGACCTC TCAGCAGGTC CGCGCGTCGT TCGACGAGGG TGAACTCGAC GCTGTCATCA TCCGCCGGGA AGCGGGCGGA GCGGATGGGG AAGTGCTTGG CACGGACCCG CTGGGCTGGC GGTCCATGGA AGACAACGTC ACAGCGCCAG ACCTCCCCGT ACCACTCGTG ACGCTTGGGC CGCCCTGCGG GGTGAGAGCC GTTGCGATCA GGCGCCTCGA TGCAACCAAG ACGCCGTGGC GGGAAGCCTT CGTCGGGGGG AGTTGCAGTG CGCTGCTGGC GGCCGTGAGA GCAGGGCTCG GTATTGCTCC AATGGGTGCC GTCGCCTCAG GGCGAATGAG CGATGTTGGA CCGCGCTTCG GCCTTCCCGA TTTACCGCCG TCGGAGATCG TGATGTTTGC CCGAACAAGC TCGCCGACGG CCAGTGCCGC AGCACGGGCA CTTGAGGTGG CGGTACAGAC GATGCTGCGT GCCACGTGA
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Protein sequence | MLDLASVRLF ILAVEFGNLT RAAEAAGTVQ PVVSTRLKGL EAALGRKLLE RTPRFVRPTE DGVAFLAKAR ALMAAHDKAA CFDDEPTMRF AIGASDHALG TGLEHVIRHV RAALPSRSAL ELRSGTSQQV RASFDEGELD AVIIRREAGG ADGEVLGTDP LGWRSMEDNV TAPDLPVPLV TLGPPCGVRA VAIRRLDATK TPWREAFVGG SCSALLAAVR AGLGIAPMGA VASGRMSDVG PRFGLPDLPP SEIVMFARTS SPTASAAARA LEVAVQTMLR AT
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