| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3598 |
|---|
| Symbol | |
|---|
| ID | 5833611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 3977156 |
|---|
| End bp | 3978049 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641369391 |
|---|
| Product | LysR substrate-binding |
|---|
| Protein accession | YP_001641047 |
|---|
| Protein GI | 163853004 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGCGCT TCGATCTCGT CGATCTCAAC CTGTTCCGCC ACGTCGTCGA GGCCGGTTCG
ATCACCCATG GGGCCGAGCG GGCGAACCTC GCGCTCGCCG CCGCCTCGGC GCGGGTGCGG
GCGATGGAGG CGTCGCTCGG CGCGGCACTC CTCCTGCGCG GGCGCCAGGG CGTGACGGTG
ACGCCCGCCG GCCGCACCCT GCTGGCGCAT GCCCGCGAGA TCATGGGCCA GATCGAGCGA
CTGCAAGGCG ATCTTTCCGT GTTCGCGGGC GGCGCGGTCG GCCAGATCCG GGTTCTGTCG
AACACCAACG CGCTCACCGA ATTCCTGCCT GAGGCGCTGT CCGCCTACCT CGCCCTGCAT
ACCGGCGTCA GCGTCGATAT CGAGGAGCGG ACATCCGACG AGATCGTCGG CATGGTGGCG
GACGGGGCCG CCGATCTCGG CATCGTCGCG GGCACCGTCG ATACCGGCAC GCTCCAGACC
TTCCCCTTCC GCCACGACCG CTTCGTGGTG GTGGTCGCGG CCGGCCACCC GCTCGCCGAC
CGCGACAGCC TCGGCTTCGC GGAGGTGCTG GAGCACGACC TCGTCGGCCT CGACCGGCCG
AGCGCCCTGA CCCGCTTCCT CGCGGCCAAG GCCTCCCGCA TCGGCCGGCC GATGCGGCTG
CGGGTGCAGT TGCGCAGCTT CGATGCGGTC TGCCGCCTCG TGGAATGCGG CGTCGGCCTC
GGCATCGTGC CGGAGACCAC GGCGCGGCGG GCCAAGCGCA CGATGAGCAT CGCGCCCGTC
CCGCTGGAGG ATCCCTGGGC GGCACGCGAC CTCAAGCTCT GCCTGCGGGA TCTGGCGGGT
CTGCCGCCCT TCGCGCAGGA TTTCGTGGCG CATCTGCGTG CGGCCGACGC ATGA
|
|---|
| Protein sequence | MMRFDLVDLN LFRHVVEAGS ITHGAERANL ALAAASARVR AMEASLGAAL LLRGRQGVTV
TPAGRTLLAH AREIMGQIER LQGDLSVFAG GAVGQIRVLS NTNALTEFLP EALSAYLALH
TGVSVDIEER TSDEIVGMVA DGAADLGIVA GTVDTGTLQT FPFRHDRFVV VVAAGHPLAD
RDSLGFAEVL EHDLVGLDRP SALTRFLAAK ASRIGRPMRL RVQLRSFDAV CRLVECGVGL
GIVPETTARR AKRTMSIAPV PLEDPWAARD LKLCLRDLAG LPPFAQDFVA HLRAADA
|
|---|
| |