| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3458 |
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| Symbol | |
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| ID | 5835119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 3836925 |
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| End bp | 3838934 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641369257 |
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| Product | hopanoid biosynthesis associated RND transporter like protein HpnN |
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| Protein accession | YP_001640915 |
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| Protein GI | 163852872 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.677236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.520256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGC CGGTGCTCGA CTACAACGCG CTGGAGCCGG GCCGCGAGGC GACCAAACTG
ATCCGGCGTC TGGCCGCCGA GCAGAACATC GACGCGGCGC ACGGCCTGCG CATCCGCCTG
ACTGGGCCGG TGGCGGTGGC CGACGACGAG TTCGCGACGC TCGCCGACGA TGCCTTCCTC
AACTACTCGC TGACCACCGC CGCCATCGTC CTGTTCCTGT GGCTGGCTTT GCGCTCCGGG
CCTCTCGTCA TCTCGGTTCT GATCACGACC TTCGCGGGTC TCGTCGTGAC AGCCGCCCTC
GGGCTCATCA TGGTGGGCGA GCTGAACCCG ATCTCGGTGG CCTTCGCCGC CCTGTTCGTG
GGGCTCGGCA TCGATTTCGG CATCCAGTTC GCCGTCCGCT ACCGGGCCGA CCGCTACGAA
CTCGGCAGCG TCGATGCGGC GTTGCGCGGT GCGGCGCGCG GCGTCGGCTG GTCGCTGACA
CTCGCGGCGG TGTCGCTGCT GGCCGGCTTC TTCGCCTTCC TGCCCACGCA GTTCCGCGGT
GTCTCCGAAC TCGGCCTCAT CGCCGGCGTC GGCATGATCG TGGCCTACCT GTTCTCGCTC
ACCCTGCTTC CGGCCCTGAT CGCGGTGTTC AACCCGCGCG GCGAGAAGCG GGCGGTCGAG
ACGACGTGGA TGGCGGGCGT CGACCACTGG ATCATCGAGC ACCGCAAGTG GGTGCTGATC
TTTGTGGGCG TTATCACTGT CGCCGGCATC CCGCTGCTCC TGAAGCTGCC CTTCGATTCC
AACCCGATGC ATCTTCGCAG CCCGAAGGTG GAATCGATCG CGACCTATCT CGACCTGATC
AAGGACCCGG CCACCAGCCC GAACTCGATC GATGTGCTGG CCCCGAACGT CGATGCGGTC
CCTGCCCTCT CCAAGCGCTT GGAGGGGCTC GACGCGGTCG CCAAGGTGAT CTCGATCGAC
ACCTTCGTGC CGCGCGATCA GGACCAGAAG CTCGCCACGA TCCAGGAGGC GGCGCAACTC
CTCGCCCCGG CCCTCAACCC GGCGCGCAAG CCGCCGCCGC CGACGGATGC CGAGAACGTC
AAGGCGCTCA AGGAGACGGC GGCGGCGCTG AAGACCATCG CGAACGGTGA TTCGGCCGGC
GCCAAGGCCG CGGACCGCCT GTCGGGCACC CTCGACACCC TCGCCGCCGC CCCGGCGGAG
AAGCGCGAGG CCGCCAGCGT CGCGCTGACC ACCGATCTCA AGACGCTGAT GAGCCGCCTG
TCCGGGCTGC TCGATCCGAA GAAGATCACC CTCGACAACC TGCCCAAGCC GCTCAAGGCC
GAGTGGGTGA CGAGCGACGG CCGCGCCCGC ATCGAGGTCC ACCCGAAGGG CGACTCGAAC
GACGACGAGG TGCTGCGCCG CTTCGCCAAG GAGGTGCAGA CGGTCGATCC CCACGCCACG
GGCGCGCCGA TCGCCACGAC CGAGTCGAGC TACACCATCC TCGGCGCCTT CGTGCAGGCG
GGTCTGACGG CGCTCGCGCT GATCTTCATC CTGCTCTCGG TCGCGCTGCG TAAACCCTGG
GACGTGGCGA TGACGCTCGG CCCGCTGGTG CTGGCGACCC TGTGGACGCT GATGGCGCTC
AAGGTCATCG GCATGCCGCT GAACTTCGCC AACATCATCG CCCTGCCGCT GATGCTAGCA
GTCGGTGTGG CCTTCCACAT CTACTACGTG ATCGCGTGGC GCGCCGGCGT CGTCGACATG
CTGGCCTCCA GCCTGACGCG GGCGATCTTC TTCTCCGCGC TGACCACGGG CACCGCCTTC
GGTTCGCTGA TGCTGTCGAG CCATCCCGGC ACCGCCAGCA TGGGCGAGCT GCTCGCGCTG
TCGCTGTTCT TCACGCTGAT CGCGGCCTTC TTCGTGGTCC CGGCCTTCCT CGGGCCGCCG
CCGAAGCAGC CGGATGCCGA GCGCCCCGAG GGCAAGGAAG CCGGCCGCCC GCCGGGCACG
GTCGCTCGCG AGCACGCGAC GGTGAAGTAG
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| Protein sequence | MIQPVLDYNA LEPGREATKL IRRLAAEQNI DAAHGLRIRL TGPVAVADDE FATLADDAFL
NYSLTTAAIV LFLWLALRSG PLVISVLITT FAGLVVTAAL GLIMVGELNP ISVAFAALFV
GLGIDFGIQF AVRYRADRYE LGSVDAALRG AARGVGWSLT LAAVSLLAGF FAFLPTQFRG
VSELGLIAGV GMIVAYLFSL TLLPALIAVF NPRGEKRAVE TTWMAGVDHW IIEHRKWVLI
FVGVITVAGI PLLLKLPFDS NPMHLRSPKV ESIATYLDLI KDPATSPNSI DVLAPNVDAV
PALSKRLEGL DAVAKVISID TFVPRDQDQK LATIQEAAQL LAPALNPARK PPPPTDAENV
KALKETAAAL KTIANGDSAG AKAADRLSGT LDTLAAAPAE KREAASVALT TDLKTLMSRL
SGLLDPKKIT LDNLPKPLKA EWVTSDGRAR IEVHPKGDSN DDEVLRRFAK EVQTVDPHAT
GAPIATTESS YTILGAFVQA GLTALALIFI LLSVALRKPW DVAMTLGPLV LATLWTLMAL
KVIGMPLNFA NIIALPLMLA VGVAFHIYYV IAWRAGVVDM LASSLTRAIF FSALTTGTAF
GSLMLSSHPG TASMGELLAL SLFFTLIAAF FVVPAFLGPP PKQPDAERPE GKEAGRPPGT
VAREHATVK
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