Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3455 |
Symbol | |
ID | 5832090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3833647 |
End bp | 3835071 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641369254 |
Product | hopanoid biosynthesis associated radical SAM protein HpnJ |
Protein accession | YP_001640912 |
Protein GI | 163852869 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.207743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.273738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACGC TCTTCCTGCA GGCCCCCACC TTCGACGGCT TCGATGGCGG CGCCGGCTCG CGCTACCAGG CCAAGCGCGA GATCAAGTCG TTCTGGTACC CGACCTGGCT GGCCCAGCCG GCGGCTCTGG TGCCGAACTC GAAGCTGATC GACGCGCCGC CGCACAACAT CAAGCTCGAA GAGATCGTGG CCCAGGCCAA CGACTTCGAC CTCGTGGTGC TCCACACCTC GGTCCCGTCC TTCAAGTCCG ACGTGAAGAC CGTCGAGGCG CTCAAGGCGG CCAACCCGCG GCTGATCGCC GGCCTGATCG GCGCCAAGGT GGCGGTGGAT GCCGCCGGCT CCATGGCCCA GGCCCCCTGC ATCGATTTCT GCGCCCGCAA CGAGTTCGAC TTCACCGTCA AGGAAGTCGC CGACGGCGTG CCGATGTCGG AGATCAAGGG TCTGTCCTAT CGTGATGCCA ACGGCGTCGT GGTCCATAAC GAGGACCGCG AGATCATGAC GGACATGGAC CAGCTTCCCT TCGTCACGAG CGTGTACAAG CGCGACCTCG AGATGGAAAA GTACTTCATC GGGTACCTCA AGCACCCCTA CATCTCGTTC TACTCGGGCC GTGGCTGCAA GAGCCGTTGC ACCTTCTGCC TCTGGCCGCA GACCGTCGGC GGGCACACCT ACCGCACCCG CTCGGTCGCG CACGTCATCG AAGAGATCAA GTATTGCCTG AAGGAGTTCC CTCAGACGAA GGAGTTCTTC TTCGACGACG ACACCTTCAC CGATAACCTG CCGCGCGCGG AAGAGATCGC CCGCGAGCTG GGCAAGCTCG GCGTGACGTG GTCCTGCAAC GCCAAGGCCA ACGTGCCCTA CGAGACCCTG AAGGTTCTCA AGGACAACGG CCTGCGCCTG CTGCTCGTCG GCTACGAGTC CGGCAACCAG CAGATCCTGA ACAACATCAA GAAGGGCATG CGCGTCGAAG TCGCGGAGAA GTTCACCAAG AACTGCCACG AACTCGGCAT CGCCATCCAT GGCACCTTCA TCGTCGGCCT GCCGGGCGAG ACGAAGGAGA CAATCCAGGA GACGATCGCA TTCGCCAAGC GCATCAACCC GCACACGATC CAGGTCTCGC TGGCGGCGCC CTACCCGGGC ACCTTCCTCT ACAAGCAGGC GGTGGAGAAC GGCTGGCTCG ACGTCGAGAA CGCCGAGCTC GTGGACGAGA ACGGCGTGCA GATCGCGCCG CTGCACTACC CGCACCTGTC GCACTCGGAG ATCTTCTCCG CGGTCGAGGA GTTCTACCGG AAGTTCTACT TCCGCGCCCC GAAGATCGCC TCGATCGTCA ACGAGATGGT CCGCTCGCCC GAGATGATGA AGCGCCGCCT GCGCGAGGGC GTCGAGTTCT GGCACTTCCT CCGGGACCGC AAGGCCGCCG CGTAA
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Protein sequence | MRTLFLQAPT FDGFDGGAGS RYQAKREIKS FWYPTWLAQP AALVPNSKLI DAPPHNIKLE EIVAQANDFD LVVLHTSVPS FKSDVKTVEA LKAANPRLIA GLIGAKVAVD AAGSMAQAPC IDFCARNEFD FTVKEVADGV PMSEIKGLSY RDANGVVVHN EDREIMTDMD QLPFVTSVYK RDLEMEKYFI GYLKHPYISF YSGRGCKSRC TFCLWPQTVG GHTYRTRSVA HVIEEIKYCL KEFPQTKEFF FDDDTFTDNL PRAEEIAREL GKLGVTWSCN AKANVPYETL KVLKDNGLRL LLVGYESGNQ QILNNIKKGM RVEVAEKFTK NCHELGIAIH GTFIVGLPGE TKETIQETIA FAKRINPHTI QVSLAAPYPG TFLYKQAVEN GWLDVENAEL VDENGVQIAP LHYPHLSHSE IFSAVEEFYR KFYFRAPKIA SIVNEMVRSP EMMKRRLREG VEFWHFLRDR KAAA
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