Gene Mext_3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3455 
Symbol 
ID5832090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3833647 
End bp3835071 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content64% 
IMG OID641369254 
Producthopanoid biosynthesis associated radical SAM protein HpnJ 
Protein accessionYP_001640912 
Protein GI163852869 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID[TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.207743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.273738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGC TCTTCCTGCA GGCCCCCACC TTCGACGGCT TCGATGGCGG CGCCGGCTCG 
CGCTACCAGG CCAAGCGCGA GATCAAGTCG TTCTGGTACC CGACCTGGCT GGCCCAGCCG
GCGGCTCTGG TGCCGAACTC GAAGCTGATC GACGCGCCGC CGCACAACAT CAAGCTCGAA
GAGATCGTGG CCCAGGCCAA CGACTTCGAC CTCGTGGTGC TCCACACCTC GGTCCCGTCC
TTCAAGTCCG ACGTGAAGAC CGTCGAGGCG CTCAAGGCGG CCAACCCGCG GCTGATCGCC
GGCCTGATCG GCGCCAAGGT GGCGGTGGAT GCCGCCGGCT CCATGGCCCA GGCCCCCTGC
ATCGATTTCT GCGCCCGCAA CGAGTTCGAC TTCACCGTCA AGGAAGTCGC CGACGGCGTG
CCGATGTCGG AGATCAAGGG TCTGTCCTAT CGTGATGCCA ACGGCGTCGT GGTCCATAAC
GAGGACCGCG AGATCATGAC GGACATGGAC CAGCTTCCCT TCGTCACGAG CGTGTACAAG
CGCGACCTCG AGATGGAAAA GTACTTCATC GGGTACCTCA AGCACCCCTA CATCTCGTTC
TACTCGGGCC GTGGCTGCAA GAGCCGTTGC ACCTTCTGCC TCTGGCCGCA GACCGTCGGC
GGGCACACCT ACCGCACCCG CTCGGTCGCG CACGTCATCG AAGAGATCAA GTATTGCCTG
AAGGAGTTCC CTCAGACGAA GGAGTTCTTC TTCGACGACG ACACCTTCAC CGATAACCTG
CCGCGCGCGG AAGAGATCGC CCGCGAGCTG GGCAAGCTCG GCGTGACGTG GTCCTGCAAC
GCCAAGGCCA ACGTGCCCTA CGAGACCCTG AAGGTTCTCA AGGACAACGG CCTGCGCCTG
CTGCTCGTCG GCTACGAGTC CGGCAACCAG CAGATCCTGA ACAACATCAA GAAGGGCATG
CGCGTCGAAG TCGCGGAGAA GTTCACCAAG AACTGCCACG AACTCGGCAT CGCCATCCAT
GGCACCTTCA TCGTCGGCCT GCCGGGCGAG ACGAAGGAGA CAATCCAGGA GACGATCGCA
TTCGCCAAGC GCATCAACCC GCACACGATC CAGGTCTCGC TGGCGGCGCC CTACCCGGGC
ACCTTCCTCT ACAAGCAGGC GGTGGAGAAC GGCTGGCTCG ACGTCGAGAA CGCCGAGCTC
GTGGACGAGA ACGGCGTGCA GATCGCGCCG CTGCACTACC CGCACCTGTC GCACTCGGAG
ATCTTCTCCG CGGTCGAGGA GTTCTACCGG AAGTTCTACT TCCGCGCCCC GAAGATCGCC
TCGATCGTCA ACGAGATGGT CCGCTCGCCC GAGATGATGA AGCGCCGCCT GCGCGAGGGC
GTCGAGTTCT GGCACTTCCT CCGGGACCGC AAGGCCGCCG CGTAA
 
Protein sequence
MRTLFLQAPT FDGFDGGAGS RYQAKREIKS FWYPTWLAQP AALVPNSKLI DAPPHNIKLE 
EIVAQANDFD LVVLHTSVPS FKSDVKTVEA LKAANPRLIA GLIGAKVAVD AAGSMAQAPC
IDFCARNEFD FTVKEVADGV PMSEIKGLSY RDANGVVVHN EDREIMTDMD QLPFVTSVYK
RDLEMEKYFI GYLKHPYISF YSGRGCKSRC TFCLWPQTVG GHTYRTRSVA HVIEEIKYCL
KEFPQTKEFF FDDDTFTDNL PRAEEIAREL GKLGVTWSCN AKANVPYETL KVLKDNGLRL
LLVGYESGNQ QILNNIKKGM RVEVAEKFTK NCHELGIAIH GTFIVGLPGE TKETIQETIA
FAKRINPHTI QVSLAAPYPG TFLYKQAVEN GWLDVENAEL VDENGVQIAP LHYPHLSHSE
IFSAVEEFYR KFYFRAPKIA SIVNEMVRSP EMMKRRLREG VEFWHFLRDR KAAA