Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3452 |
Symbol | |
ID | 5833232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3830402 |
End bp | 3831595 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641369251 |
Product | membrane protein |
Protein accession | YP_001640909 |
Protein GI | 163852866 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00374] conserved hypothetical protein [TIGR03476] putative membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.147262 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGCTT CGGGTGGGAT TTCGACAACA CAAGCCTTCG CCGATGATCG AAAGAGGCTG ATGAAGCGTC TCACAACACT GGCATCGATC GTTGGATTGG GCACGGCGCT CTCGCTGTTC CTGTCTTCCG GCGTGTCCGA TGTCACCGCC GCGGTCGTCA GCGCGGGTTG GGGGACGCTC GCCGTCGTGC TCGCCCGCTT TGCAGCGGTC GCCTGGGCGG GCCTCGGCTG GTACGCGGTG TTCCCCCGCG GCGCCGGGCC GACCCTGCGT GACTGCATCT CGCTGCGCTT CGTGCGCGAG GGCATCAACA CGCTCCTGCC GGTTGCACAG GTCGGCGGCG ACCTCATCGG CGCGCGCCTG CTCACCCGAA GCGGTACGCC GGGCGGCATG GCCGGCGCCA GCATGTTCGT CGATCTGATG ACCCAGGCGG TCACGCAGCT CATCTTCACC ATCGCCGGGC TTCTCCTGCT GATGCAGATC ACCGGCGACG GGCCGATGGT CCGCACCGTC GCGGGCGGCG TGCTGATCGC CATTCCGGCG CTGGCCGCCT TCTACGTCAT CCAGCGCCGC AGCGGTCACC GCCTGATCGA GGCCGCGCTG AGCCGCTTCG CCGCCGGCCG CGAGTGGCGC GCGCTCGGCG CGATCGACGT ACTCTTCGAG AACCTGCGCC GCCTCTACGG CAACCGCGCC CGCGTCGGCG CGGCGCTTCT GATCCACCTC CTCGGCTGGG TCGCCGGCAC CGTCGAGGTG TGGATCGCCC TCAACGCGAT GGGCTACTCC ATCAGCTTCC TCGACGCGCT GGTGATCGAG AGCCTCGCTC AGGCCGTGCG CGGTGCCGCC TTCGTCGTGC CCGGCGCCAT CGGGGCCCAG GAGGGCGGCC TGATCGCTCT GGGCGCCCTG TTCGGCATCC CGGTGGAAGC CGCGCTCGCC CTCTCCCTGG TCAAGCGCGT CGCCGACCTC GCCGTCGGCC TGCCGAGCCT CGCCCTGTGG AACCTCATGG AGCGCAAAGG CGCGGCGCCT GCCGAAACCG ACGGCACCGA GACGGTGCGC GAGGGGCTCG GCGCGATCCG GGCACGGCTC GGCCGCCGCT CGGGCGCGAC CCCGCTCGCC CCGGCCTACG GTTTCTCCGC CGCCCGGAAC CCGGCCCCCC TTTCCTCCGA CAACGAAGCT GGAGCGCTCC AGAAGTGCGC CTGA
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Protein sequence | MVASGGISTT QAFADDRKRL MKRLTTLASI VGLGTALSLF LSSGVSDVTA AVVSAGWGTL AVVLARFAAV AWAGLGWYAV FPRGAGPTLR DCISLRFVRE GINTLLPVAQ VGGDLIGARL LTRSGTPGGM AGASMFVDLM TQAVTQLIFT IAGLLLLMQI TGDGPMVRTV AGGVLIAIPA LAAFYVIQRR SGHRLIEAAL SRFAAGREWR ALGAIDVLFE NLRRLYGNRA RVGAALLIHL LGWVAGTVEV WIALNAMGYS ISFLDALVIE SLAQAVRGAA FVVPGAIGAQ EGGLIALGAL FGIPVEAALA LSLVKRVADL AVGLPSLALW NLMERKGAAP AETDGTETVR EGLGAIRARL GRRSGATPLA PAYGFSAARN PAPLSSDNEA GALQKCA
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