Gene Mext_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3452 
Symbol 
ID5833232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3830402 
End bp3831595 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content71% 
IMG OID641369251 
Productmembrane protein 
Protein accessionYP_001640909 
Protein GI163852866 
COG category 
COG ID 
TIGRFAM ID[TIGR00374] conserved hypothetical protein
[TIGR03476] putative membrane protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.147262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCTT CGGGTGGGAT TTCGACAACA CAAGCCTTCG CCGATGATCG AAAGAGGCTG 
ATGAAGCGTC TCACAACACT GGCATCGATC GTTGGATTGG GCACGGCGCT CTCGCTGTTC
CTGTCTTCCG GCGTGTCCGA TGTCACCGCC GCGGTCGTCA GCGCGGGTTG GGGGACGCTC
GCCGTCGTGC TCGCCCGCTT TGCAGCGGTC GCCTGGGCGG GCCTCGGCTG GTACGCGGTG
TTCCCCCGCG GCGCCGGGCC GACCCTGCGT GACTGCATCT CGCTGCGCTT CGTGCGCGAG
GGCATCAACA CGCTCCTGCC GGTTGCACAG GTCGGCGGCG ACCTCATCGG CGCGCGCCTG
CTCACCCGAA GCGGTACGCC GGGCGGCATG GCCGGCGCCA GCATGTTCGT CGATCTGATG
ACCCAGGCGG TCACGCAGCT CATCTTCACC ATCGCCGGGC TTCTCCTGCT GATGCAGATC
ACCGGCGACG GGCCGATGGT CCGCACCGTC GCGGGCGGCG TGCTGATCGC CATTCCGGCG
CTGGCCGCCT TCTACGTCAT CCAGCGCCGC AGCGGTCACC GCCTGATCGA GGCCGCGCTG
AGCCGCTTCG CCGCCGGCCG CGAGTGGCGC GCGCTCGGCG CGATCGACGT ACTCTTCGAG
AACCTGCGCC GCCTCTACGG CAACCGCGCC CGCGTCGGCG CGGCGCTTCT GATCCACCTC
CTCGGCTGGG TCGCCGGCAC CGTCGAGGTG TGGATCGCCC TCAACGCGAT GGGCTACTCC
ATCAGCTTCC TCGACGCGCT GGTGATCGAG AGCCTCGCTC AGGCCGTGCG CGGTGCCGCC
TTCGTCGTGC CCGGCGCCAT CGGGGCCCAG GAGGGCGGCC TGATCGCTCT GGGCGCCCTG
TTCGGCATCC CGGTGGAAGC CGCGCTCGCC CTCTCCCTGG TCAAGCGCGT CGCCGACCTC
GCCGTCGGCC TGCCGAGCCT CGCCCTGTGG AACCTCATGG AGCGCAAAGG CGCGGCGCCT
GCCGAAACCG ACGGCACCGA GACGGTGCGC GAGGGGCTCG GCGCGATCCG GGCACGGCTC
GGCCGCCGCT CGGGCGCGAC CCCGCTCGCC CCGGCCTACG GTTTCTCCGC CGCCCGGAAC
CCGGCCCCCC TTTCCTCCGA CAACGAAGCT GGAGCGCTCC AGAAGTGCGC CTGA
 
Protein sequence
MVASGGISTT QAFADDRKRL MKRLTTLASI VGLGTALSLF LSSGVSDVTA AVVSAGWGTL 
AVVLARFAAV AWAGLGWYAV FPRGAGPTLR DCISLRFVRE GINTLLPVAQ VGGDLIGARL
LTRSGTPGGM AGASMFVDLM TQAVTQLIFT IAGLLLLMQI TGDGPMVRTV AGGVLIAIPA
LAAFYVIQRR SGHRLIEAAL SRFAAGREWR ALGAIDVLFE NLRRLYGNRA RVGAALLIHL
LGWVAGTVEV WIALNAMGYS ISFLDALVIE SLAQAVRGAA FVVPGAIGAQ EGGLIALGAL
FGIPVEAALA LSLVKRVADL AVGLPSLALW NLMERKGAAP AETDGTETVR EGLGAIRARL
GRRSGATPLA PAYGFSAARN PAPLSSDNEA GALQKCA