| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3441 |
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| Symbol | |
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| ID | 5833298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 3819865 |
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| End bp | 3821457 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641369240 |
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| Product | phytoene desaturase |
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| Protein accession | YP_001640898 |
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| Protein GI | 163852855 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.826621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0554878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGCAGT CGCGGGAAGG TTTGCGTACC CTGTTGGGCC GCCGCACGAT CGTCGTCGGG
GCCGGCCCCG GCGGGCTTGC CACGGCGCTG CTCCTGGCCA AGGCCGGACT GCACGTCACG
CTGATCGAAA AGGACGCCCA AGTCGGCGGG CGCACCAAGA CCGTGGAGGC GCCGGGCGGC
TACCGCTTCG ACATCGGCCC GACCTTCTTC CTCTATCCGC AGATCCTCGC CGACATCTTC
GAATCCTGCG GCGAGCGCCT GGAAGACCAT GTCCGGCTGG AGCGGCTCGA TCCGCAATAC
AACCTCGTCT TCGGGGGTGA GGGCGGCATT TCGGGGCAGA TCCGCGCCAC CGGCGATGTG
CCGCGGCTGA AGGCCGAGAT CGCCCGCCTC GCCCCCGCCG ATGCCGAGAA CGTCGAGAAG
TTCTTCGAAG AGAACCGGAC CAAGCTGAAC TACTTCAAGC CGGTGCTGGA GCAGCCCTTC
GACAACATCC TGTCGATGGC GAGCCCGGCG ATGCTGGCCG CCCTGCCCCA TCTCCATCCC
GGCCGCAGCG TGGACCGGGA TCTCAAGCGC TACTTCGCCG ACCCGCGGGT GCGCCTCGCC
TTCTCGTTCC AGACCAAATA TCTCGGGATG AGCCCCTTCC GCTGCCCGAG CCTGTTCACG
ATCCTCTCGT TTCTTGAATA CGAGCACGGG GTCTACCACC CGGTCGGCGG CTGCGGCGCG
GTCTCGGAGG CGATGGCGGG GCTGGCCCGC CGCATGGGCG TCGACATCCG CCTCGGGCAA
TCGGTCGAGC GGATCCTGTT CGAGGGCAAG CGCGCCACCG GCGTGGTCGT CGGCGGCGAG
ACTCTGAAGG CCGATGCGGT GGTCGTGAAC GGCGACTTCG CCAAGGTGAT CCGCGATCTC
GTGCCGGAGG AGCGGCGCCC GCGCTGGCGC GACGCCAAGA TCGGCAAGGC GCGCCTCTCC
TGCTCGACCT ACATGCTCTA CCTCGGCATC GAGGGCAAAA TGCCCGAGAG CCTGGGCCAC
CACACCATCC TGCTGGCCAA GGAATACGAG CGCAACATCA AGGAGATCAC CGGCGGCACG
CTGCCGATGG AGCCTTCGAT CTACGTGCAG CATGCCGGCT TCACCGATGG CGGCATGGCG
CCGCCCGGCC ACACCGCCCT CTACGTGCTG GTGCCGGTGC CGAACCTGAA GGCGGGCATC
GATTGGGAGA CGGTCGGCCC GACCTACCGC AAGCTGATTC TGGAGCGCTT GAAGCTCCTC
GGCCTTCCCG ACATCGAGAG CCGCATCCGC TACGAGCGCG TGGTCGATCC CCGCGACTGG
CGCGACGAAT TCGCGGTGCA CGAGGGCGCG ACCTTCAACC TCGCCCACGA TCTCATGCAG
ATGCTGTGGT TCCGGCCGCA TAACCGCTTC GGGCCGGGGC TCTACCTCGT CGGCGGCGGC
ACCCATCCGG GCTCCGGTCT TCCGGTGATC TACGAGGGCG CGCGCATCTC GGCCCGGCTC
CTGATCGAGG ATCTCGCCAA GGAGAAGGCG CCCGCGATCC TGGCGGACCT GCCGACGACC
TCGCCGCTCG CCACGCAGGG CGATCCGAGC TGA
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| Protein sequence | MLQSREGLRT LLGRRTIVVG AGPGGLATAL LLAKAGLHVT LIEKDAQVGG RTKTVEAPGG
YRFDIGPTFF LYPQILADIF ESCGERLEDH VRLERLDPQY NLVFGGEGGI SGQIRATGDV
PRLKAEIARL APADAENVEK FFEENRTKLN YFKPVLEQPF DNILSMASPA MLAALPHLHP
GRSVDRDLKR YFADPRVRLA FSFQTKYLGM SPFRCPSLFT ILSFLEYEHG VYHPVGGCGA
VSEAMAGLAR RMGVDIRLGQ SVERILFEGK RATGVVVGGE TLKADAVVVN GDFAKVIRDL
VPEERRPRWR DAKIGKARLS CSTYMLYLGI EGKMPESLGH HTILLAKEYE RNIKEITGGT
LPMEPSIYVQ HAGFTDGGMA PPGHTALYVL VPVPNLKAGI DWETVGPTYR KLILERLKLL
GLPDIESRIR YERVVDPRDW RDEFAVHEGA TFNLAHDLMQ MLWFRPHNRF GPGLYLVGGG
THPGSGLPVI YEGARISARL LIEDLAKEKA PAILADLPTT SPLATQGDPS
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