Gene Mext_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3406 
Symbol 
ID5831350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3775936 
End bp3776796 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content69% 
IMG OID641369205 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001640863 
Protein GI163852820 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.316546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAA CCATGGCCGA TTCCGCCGCG ATCCGATCGC TCCCTGGCCG CGCAAGCCGC 
GCCAAGGCCG CCGCGCCGCT GCAACGCAAG CCCCTGCGGC TACCGACGGG TAAGCTGCTG
CCCTGGCTGC TGCCGACTCT CGTCCTGGCC GGCTGGCAGG CGGCGGCCTC GTTCGGGCTC
GTCTCGACGC GGTTCATGCC CGCGCCGCTC GACGTGGCCG CCGCGGGCTG GCGCCTCGCC
CAGACCGGCG AACTCTGGGA GAACCTGTGG GTCAGCTTCG CCCGCGCAGC CGCCGGCTTC
CTCATCGGCG GCGGCATCGG GCTGAGCTTC GGGCTCGCCA ACGGCCTCTC GAACCTCTCG
GAAAAGCTCA CCGACACCAC GCTCCAGATG GTGCGCAACA TTCCGCACCT GTCGCTGATC
CCGCTGGTGA TCCTGTGGTT CGGCATCGAC GAGGGGGCCA AGCTCTTCCT CGTGGCGCTC
GGCGTGTTCT TCCCCGTCTA CGCCAACACC CTGCACGGCA TCCGCTCGGT CGATCCGCAG
CTCATCGAGA TGGGCCGGGT CTACGGCATG AACCGGCGCG AGCTGTTCTG GCGCGTGGTG
CTGCCCGGCG CGCTGCCCTC GATCTTCGTC GGTGTGCGCT ACGCGCTCGG CATCATGTGG
CTGACGCTGA TCGTCGCCGA GACGATCTCG GCCAATTCCG GCCTCGGCTA CATGGCGATG
CAGGCCCGCG AGTTCATGCT GGTCGATGTC GTGGTGCTGG CGATCCTGAT CTACGCCGGG
CTGGGCAAGA TCGCAGACAG CCTGACCCGG GCGCTCGAGC GCACCTGCCT CTCCTGGAAC
CCGGCCTACC GCAACGCCTG A
 
Protein sequence
MSRTMADSAA IRSLPGRASR AKAAAPLQRK PLRLPTGKLL PWLLPTLVLA GWQAAASFGL 
VSTRFMPAPL DVAAAGWRLA QTGELWENLW VSFARAAAGF LIGGGIGLSF GLANGLSNLS
EKLTDTTLQM VRNIPHLSLI PLVILWFGID EGAKLFLVAL GVFFPVYANT LHGIRSVDPQ
LIEMGRVYGM NRRELFWRVV LPGALPSIFV GVRYALGIMW LTLIVAETIS ANSGLGYMAM
QAREFMLVDV VVLAILIYAG LGKIADSLTR ALERTCLSWN PAYRNA