Gene Mext_3403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3403 
Symbol 
ID5835367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3772777 
End bp3773952 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content72% 
IMG OID641369202 
Productmajor facilitator transporter 
Protein accessionYP_001640860 
Protein GI163852817 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCCC TGCCGATCCT CGCGCTCGCC GTCGCCTCCT TCGGCATCGG CACCACCGAG 
TTCGTCATCA TGGGCCTCCT GCCGGAGATG GCGCGCGACT TCGACGTCAC GATCCCGCAG
GCGGGCCACC TCGTGTCCGG CTACGCGCTC GGTGTAGTGA TCGGCGCGCC GCTCGTAGCA
ATGGCAACCG CGCACCTGCC GCGCAAAGCG GCCCTGCTCG CCCTGATGGC GGTGTTCACC
CTCGGCAACC TCGCCTGTGC CCTGGCGCCG AGCTACGCGT GGCTGATGGC CGCGCGGGTC
GCCACCGCCT TCGCCCACGG TGCCTTCTTC GGCATCGGCG CCATCGTCGC GCGCAACCTC
GTGCCGCGGG AGAAGCGTAC GCAGGCCGTC TCGCTGATGT TCGCCGGGCT GACGCTCGCC
AACGTTCTCG GCGTGCCGCT CGGAACCGCG CTCGGACAGG CCTTCGGCTG GCGCTCGACC
TTCTGGGCGG TGGTCGGCAT CGGGCTCGTG GCGGGTGCGG CGATCGCGCT CGCCCTGCCC
GGCGGAATGC CCGGCACGCG GGGCGGCCTC GGACGGGAAT TCCGGGCGCT CGGGCGCTGG
CCGGTGCTGC GGCCGATGCT GGTCTCGACC CTGTCCTCGG TGAGCTTCTT CACCGTCTTC
ACCTACATCG CGCCGTTCCT GCTCACCGTC ACGCATCTGA CACCCGGCGG CGTGACGGGG
GCGCTGTTCG CGGCCGGTGT CGGCCTCACG ATCGGCAATC TCGCCGGCGG CTGGCTCGCC
GACCGCAGCC TGATGCGCAC GGTGCTCGGC AGCTTTGCTG CCCTCATCGC GGTCCTCGTC
GTGTTCCCGC TGGTCGCGCC CTTCACCTGG CCGGCGCTGG CGGTGCTGGT GCTGTGGAGC
GGGCTCACCT TCGCCCTGGT CTCGCCGCTT CAGGTCTGGG TGCTGGAGGC GGCCAGCGAC
GCCCCGAACC TCGCCTCGAC CCTGAACCAG GGGGCGTTCA ATCTCGGCAA CGCCCTCGGC
GCCTGGCTCG GCGGCACGGC GCTGACGCTG GGCGTGGGTT ACGCGGAGTT GCCGGCCCTG
GCGGCCGTCG TCTCCCTTCT GGGCCTCGGA CTTGCCGCTA CAGGAGCCGC GCGGTCCCTG
TGGCCGTCCC TGGCGGCAAG CCAGGGACGG TCGTAA
 
Protein sequence
MASLPILALA VASFGIGTTE FVIMGLLPEM ARDFDVTIPQ AGHLVSGYAL GVVIGAPLVA 
MATAHLPRKA ALLALMAVFT LGNLACALAP SYAWLMAARV ATAFAHGAFF GIGAIVARNL
VPREKRTQAV SLMFAGLTLA NVLGVPLGTA LGQAFGWRST FWAVVGIGLV AGAAIALALP
GGMPGTRGGL GREFRALGRW PVLRPMLVST LSSVSFFTVF TYIAPFLLTV THLTPGGVTG
ALFAAGVGLT IGNLAGGWLA DRSLMRTVLG SFAALIAVLV VFPLVAPFTW PALAVLVLWS
GLTFALVSPL QVWVLEAASD APNLASTLNQ GAFNLGNALG AWLGGTALTL GVGYAELPAL
AAVVSLLGLG LAATGAARSL WPSLAASQGR S