Gene Mext_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3400 
Symbol 
ID5835364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3770664 
End bp3771125 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content69% 
IMG OID641369199 
Producttwin-arginine translocation protein, TatB subunit 
Protein accessionYP_001640857 
Protein GI163852814 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01410] twin arginine-targeting protein translocase TatB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGACA TGAGCTGGGG CGAGGTGATG CTGATCGGCG GCGTCGCCCT GATCGTCATC 
GGGCCGAAGG ATCTGCCGAA GGCCCTGCGC ACGCTGGGCC AGATCACCAC CAAGGTCCGG
CGCATGGCCG GCGAGTTCCA GTCGCAGTTC AACGAAGCGA TCCGCGAGGC GGAGCTGGAA
GAGGTCCGCC GCGACGTCGA GGGCGTCAAG CGCACCGTCG ATTCCGCGCG GCCGACCTTC
AACCCCGTCG ACACCATCCG CAACGAGATC CGCAGCGCGG TCGAGGGCCG TCCCGGCTCC
GGCAGCAAGG ATACCGGCGC GAAAGAGACG GGCAGCTTCG ACGTGCCGCG TCCGACGCCC
GGCCAGCAGG CCGAACAGAT GCACGGGGCT CCGGCACACG CCGCCGTCGA GACCTCTTCC
ACCACCCCCG GCACCAAGCC CGAGACAGGC CCGACTCCAT GA
 
Protein sequence
MLDMSWGEVM LIGGVALIVI GPKDLPKALR TLGQITTKVR RMAGEFQSQF NEAIREAELE 
EVRRDVEGVK RTVDSARPTF NPVDTIRNEI RSAVEGRPGS GSKDTGAKET GSFDVPRPTP
GQQAEQMHGA PAHAAVETSS TTPGTKPETG PTP