| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3338 |
|---|
| Symbol | |
|---|
| ID | 5833483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 3701765 |
|---|
| End bp | 3702847 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641369138 |
|---|
| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
|---|
| Protein accession | YP_001640796 |
|---|
| Protein GI | 163852753 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.305053 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGAT CTTATCTCGA TCTCGCAAAT AAAAGAACGA TCATGTCATC GCACTTCATC
CGGTGGGCAA TTCTTCTCTT CGCGCTGTTC GGTGCCTCGG GCGCCGCCTT GGCGCAAGGC
CAGGCTCAGA GCCTGCCGGT GCGGATCGGG GCGATCCCCG TGCTCGGTGC CGCGCCGCTC
TTCGTCGCCG AGCGGGAGGG CTGGCTCGGG GCCGGCGGGC TCAAGCCCAC CGTAACGCTG
TTCGATTCCG GGCCGAACGC GGTGCAGGCG GCGGCGAGCG GCACGGTCGA TGTCTACGTC
GCCGGGATCA CGCCGGTGGC GATCGGGCGG ACGCGCGGGG TCGATCTGCG GGTGGTGGCG
GCGACCGCTA TCGGCGAGAA CGTGCTCGTG GCAGGCGCCA AGCTCGCCGG ACCGCTCACC
GACGGCACGG CACCGGCCGC CGCCTTTCGG CGCTTCCGGG AGGAGACGGG CCGCCCGGCC
AAGATCGCCA CGCAGCCGCC CGGTTCGATC CCCTACACCA ATCTGTCCTA CTGGCTGCGC
GAGGTCCACA AGGTCGATCC GGCCGACGTG CAGATCCTGA CACTCGGCAT CGACGCCGCG
CAGCAGGCGA TCCTCGCCGG TGCGGTCGAG GCCGCGACGG TGCGCGAGCC GGGCCTCAGC
ATCATCCGCG AGCGCAACCC GCAGATCCGC CTCGTCGCTA GCGGCAGCGA GCTGTTTCCC
GGCCAGCCCG GCACCGTTGT GGCGGTGCGC GGCGCCTTCC TCGAGCAGAA TCCGGCGGCC
GTGCGCACCC TCGTCTCGGC GATCGTGCGG GCCGTCGATC TGATCAAGCG CGAACCCGAG
CGGGCGCTTC CGGCGGTGGA GGCCGCGCTC GGCAAGGGCA TCGTCACCGC CGCGACCCTG
CGCAACGCGC TCGCCTCGCC GGCGACCCAG TATGTCGCCG ATCCCCGCAC CATCGTGGCG
GCGACCGGCG CGATGCTGGC CTTCCAGACC AAGCTCGGCA TCAGCGAGCA GACGCCGCCG
ACGGAGGGAT TGTTCGACTC CCGCTTCTTC GAGGCGGCCC AGGCCGAGGC GAGCGCGCGA
TAG
|
|---|
| Protein sequence | MNRSYLDLAN KRTIMSSHFI RWAILLFALF GASGAALAQG QAQSLPVRIG AIPVLGAAPL
FVAEREGWLG AGGLKPTVTL FDSGPNAVQA AASGTVDVYV AGITPVAIGR TRGVDLRVVA
ATAIGENVLV AGAKLAGPLT DGTAPAAAFR RFREETGRPA KIATQPPGSI PYTNLSYWLR
EVHKVDPADV QILTLGIDAA QQAILAGAVE AATVREPGLS IIRERNPQIR LVASGSELFP
GQPGTVVAVR GAFLEQNPAA VRTLVSAIVR AVDLIKREPE RALPAVEAAL GKGIVTAATL
RNALASPATQ YVADPRTIVA ATGAMLAFQT KLGISEQTPP TEGLFDSRFF EAAQAEASAR
|
|---|
| |