Gene Mext_3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3336 
Symbol 
ID5832868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3697740 
End bp3698963 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content71% 
IMG OID641369136 
Productacyl-CoA dehydrogenase type 2 
Protein accessionYP_001640794 
Protein GI163852751 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGA TCGATGCAGG CTGGGGGGCC GGCCCGAGTG GACGCTACGA GGAACTCGCG 
GGTCGCTTCA GGCCGGTCCT CGGCGAGATC CGTTCCACCG CGGTCGCGCG GGACGCCGAG
CGGCGCTTGC CGCATGCCGA ACTCGGTTGG CTGAAGGAAG CGGGCTTCAC CACCCTGCGT
CTGCCCGCCG AGGCGGGCGG GCACGGCGCG AGCCTGCCCG AACTCTTCAA CCTGCTGATC
GAGCTGTCGG CGGCCGATTC CAACGTTACC AATGCGCTGC GCGCCCATTT CGGCTTCACC
GAGGACGTGC TGACCGCCGC CTCGGCGGAA TGGCGTACGC GATGGATCGC CCGGCTCGCC
GCGGGCGAGA CAGTCGGCAG CGGCGTGTCC GAGACGGGGC CGGCCAAGGT CGGGCAGTTC
GACACGGTGG TGCGCCGACG CGGCGACGAG CGGGTGGTGG ATGGCCGGAA ATTCTACACG
ACCGGTGCGC TCTTCGCCGA CTGGATCCAC CTTTCGGCCC AGGACGAGGA CGGCGCGCCC
GTGGTCGCCG CGGTGCCGAC GCGAGCGCCC GGCGTCACGA TTGAGGACGA CTGGGACGGC
TTCGGGCAGG CCCTGACCGC GAGCGGCACC GCCCGCTTCG AGGGCGTCGT GCTGGCGCCG
GATCTGATCA AGCCGGAGAC GGTGCGCTTT CCCTTCGCCA TGGCCTTCTT CCAGCTCGTG
CATCTGGCAA CGCTCGCCGG CATTGCTCGG GCGGCGGCCG AGGATGCGGC GCGGCTGGTG
GCGGCGCGCA CCCGGGTCTA CAGCCACGGG AATGCCGACC GCACGGCGGA CGATCCGCAA
ATTCTGGCTG TGGTTGGCCG CGTCCGTGGC AATGCCTATG CGGCCGGTGC CCTCGTGCTG
AAGGCGGCCG AGGCGGTGCA ACGCGCGGCG GAGGCGGTGC AGCTGGGCGG GCGCGAAGCG
GCGGAGCCGG TCACGGCCCT CGCCGATGTC GAGGTCAACC AAGCCGTCAC TGTGGTGACC
AACCTCGTAT TGGAGGCGAC CACGGTGCTG TTCGATGCCC TCGGTGCGTC CGCCGTGAAG
ACCGAGCACG GCCTTGACCG CTACTGGCGC AACGCCCGCA CCATCGCCTC GCACAACCCG
CGGATCTACC GCGAGCGCAG CGTCGGTGCC TTCGCAGTCA ACGGCACGCG CCCACCCAGG
GAGTACCGCG TCGGTACGGC CTGA
 
Protein sequence
MSQIDAGWGA GPSGRYEELA GRFRPVLGEI RSTAVARDAE RRLPHAELGW LKEAGFTTLR 
LPAEAGGHGA SLPELFNLLI ELSAADSNVT NALRAHFGFT EDVLTAASAE WRTRWIARLA
AGETVGSGVS ETGPAKVGQF DTVVRRRGDE RVVDGRKFYT TGALFADWIH LSAQDEDGAP
VVAAVPTRAP GVTIEDDWDG FGQALTASGT ARFEGVVLAP DLIKPETVRF PFAMAFFQLV
HLATLAGIAR AAAEDAARLV AARTRVYSHG NADRTADDPQ ILAVVGRVRG NAYAAGALVL
KAAEAVQRAA EAVQLGGREA AEPVTALADV EVNQAVTVVT NLVLEATTVL FDALGASAVK
TEHGLDRYWR NARTIASHNP RIYRERSVGA FAVNGTRPPR EYRVGTA