Gene Mext_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3334 
Symbol 
ID5832866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3695529 
End bp3697151 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content67% 
IMG OID641369134 
Productchaperonin GroEL 
Protein accessionYP_001640792 
Protein GI163852749 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCCA AGGACGTGAA ATTCTCGGGT GATGCGCGCG AGCGCCTGTT GCGCGGCGTC 
GATATTCTGG CGGATGCCGT GAAGGTGACG TTGGGGCCGA AGGGCCGCAA CGTCGTGATC
GAGAAGAGTT TCGGGGCGCC GCGCATCACC AAGGACGGCG TCACCGTCGC CAAGGAGATC
GAGTTGGAGG ACCGCTTCGA GAATCTCGGC GCCCAACTCC TGCGCGAAGT CGCCTCGAAG
ACCAACGATC TGGCCGGCGA CGGCACCACA ACCGCGACCG TGCTCGCCCA GGCGATCGTC
CGCGAGGGCG CCAAGGCGGT GGCGGCGAAC TTCAACCCGC TCGACTTGAA GCGCGGCATC
GACCTCGCCA CCGCCGCCGC CGTGAAGGAC ATCACCGGAC GCGCCCGCAA GGTGACCGCC
TCCGACGCCA TCGCTCAAGT CGGCACAATC TCCGCCAACG GCGACGCCGA GATCGGCCGC
CTCATCGCCG AGGCCGTCGA GCGGGTCGGC AAGGAAGGCG TCATTACGGT GGAGGAGGCC
AAGACCGCCG AGACCGAACT CGATGTCGTC GAGGGCCTGC AGTTCGACCG CGGCTACCTC
TCGCCGTACT TCGTGACGAA TACGGAAAAG CTGATTGCCG AACTCGAGGA TCCCTACATC
CTGATCCACG AGAAGAAGCT CTCCTCGCTG CAGCCGCTGC TGCCGGTGCT GGAGGCGGTC
GTCCAGTCGA GCCGTCCCCT GCTCATCATC GCCGAGGATG TGGAGGGCGA GGCGCTCGCC
ACCCTCGTCG TGAACAAGCT GCGCGGCGGC CTCAAGATCG CGGCAGTGAA GGCTCCGGGC
TTCGGCGACC GTCGCAAGGC GATTCTTGAG GACATCGCGA TCCTCACGAA CGGCCAGACC
ATCTCCGAGG ATCTCGGGAT CAAGCTCGAG AACGTGTCGC TTCCCCTGCT GGGTCAGGCC
AAGCGGGTGC GCATCGACAA GGAGAGCACC ACGATTGTCG ACGGAGCGGG GGACAGGGCG
CAGATCGACG CGCGCGTCGC CCAGATCAAG GCGCAGATCG AGGAGACCAC CTCGGACTAC
GACCGCGAGA AGCTCCAGGA GCGCTTGGCC AAGCTCGCGG GCGGCGTCGC GGTGATCCGC
GTCGGCGGCG CGACCGAGGT CGAGGTCAAG GAGAAGAAGG ACCGGGTGGA CGACGCGCTC
AACGCCACCC GCGCCGCGAT CGAGGAAGGC ATCGTTCCGG GCGGCGGCAC CGCGCTCCTG
CGGGCCAAGG CCGCCGTATT AGCGCTCAAG AGCGAGAATG CCGATGTGAA GGCCGGCATC
AACATCGTGC TCAAGGCGCT CGAAGCGCCG ATCCGGCAGA TCGCGGCCAA TGCCGGGGTC
GAGGGCTCGA TCGTCGTGTC GAAGGTGATC GAGAACGGCT CGGAAACCTT CGGATTCGAC
GCCCAGACCG AGACCTACGT CGACCTGATC GAGGCCGGCA TCGTCGATCC GGCCAAGGTT
GTGCGCACGG CACTGCAGGA CGCGGCCTCG GTCGCCGGCC TGCTGGTGAC GACGGAGGCG
TTGATCGCCG AGCGGCCGAA GGAGAAGGCG CCGCCACTGC CGCCCGGCGG GCCGGACTTC
TGA
 
Protein sequence
MAAKDVKFSG DARERLLRGV DILADAVKVT LGPKGRNVVI EKSFGAPRIT KDGVTVAKEI 
ELEDRFENLG AQLLREVASK TNDLAGDGTT TATVLAQAIV REGAKAVAAN FNPLDLKRGI
DLATAAAVKD ITGRARKVTA SDAIAQVGTI SANGDAEIGR LIAEAVERVG KEGVITVEEA
KTAETELDVV EGLQFDRGYL SPYFVTNTEK LIAELEDPYI LIHEKKLSSL QPLLPVLEAV
VQSSRPLLII AEDVEGEALA TLVVNKLRGG LKIAAVKAPG FGDRRKAILE DIAILTNGQT
ISEDLGIKLE NVSLPLLGQA KRVRIDKEST TIVDGAGDRA QIDARVAQIK AQIEETTSDY
DREKLQERLA KLAGGVAVIR VGGATEVEVK EKKDRVDDAL NATRAAIEEG IVPGGGTALL
RAKAAVLALK SENADVKAGI NIVLKALEAP IRQIAANAGV EGSIVVSKVI ENGSETFGFD
AQTETYVDLI EAGIVDPAKV VRTALQDAAS VAGLLVTTEA LIAERPKEKA PPLPPGGPDF