Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3300 |
Symbol | |
ID | 5831443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3658455 |
End bp | 3660206 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641369100 |
Product | PAS sensor protein |
Protein accession | YP_001640758 |
Protein GI | 163852715 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.928069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTACGACA GCGCGGACAA GGGCTCTCGA CCGGCGGACC TCTCGCCCGC CTTGTACCGC GCGGCCTTCG ACCGCGCGCC GGTGGGGCTC GCCGTGTTCT CGCCCGATGG GCGCACGATC CGCACCGCCA ATCCCTGCCT GTACCGCTGG CTCGGCTACC CCTCGGGCTT CCTCGATGGC CGCCCGATCG ACCAAGTGAT CGGCCGCGAC GCGTTCGACG GGGAGACGCC CGGGCTGAAG GCCGGCATCC GCCGTTGGCT GCGGGCGGAT GGCAGCAGCC TCGATCTGCG CCTGACCCTG TCCGGAGAGG ACGGTGGCGA GACGGTCGCG GTCGTGAACC TCGTCGATGC CGACGATCTC GTCCGGGCCG AGCAGAACCG CGACGCCCTG ACGGCGGCGG GGCTCGGCGA ATGGCGCTGG GATCTCGTCA CCGGACAGAT GGTGTTTTCC CGCCGCGCGG CGCAGATCCT CGGCTACGCG CCGGGGCGCT CCGTCACCTG GGAGGGGATG CGCGGGCAAG TCGATCCAGA CGACGCCGAA CGGATTCAGA CCGCGGTCGC CGCCGCCATC GCCGAGCGGC GCCCCTACGC GTTCCAGACC CGTTTCCGGC GCGCCACCGA CGGCGCCGAG ATCTGGATCG GCGCCCGCGG CGAGGCGCTT CTCGCCGCCG ACGGTGCGCC CATCGGCATC GTCGGCGTGG TGCAGGACGT CACCACCCGG GTCGAGGCCC GGGAGGCCCT GGCCGAGCGC GAGGAGCGCC TGCGGGTCGC TACCACGGTC GCCGACCTCG GCATCTTCGA GTGGCACGTC CTCGACGACC GGGCGACCTG GGAGAACGAG CGGATGTTCG CGATCTTCGG CCGCCGGCCG GATGAGGGCA GCATCGGCAA GTCCGCCTTC CTCAAGGAAA TCCTCCACCC CGAGGATCGC CCCGTCTTCC GGCAGGCGAT CCTGCGGGCG CTGCGCGACG ATACGATCCT GCACGCCACC GGCCGCATCC GCCGCCACGA CGACGGCCTT TGGCGCACCA TCGACATGGC CGGCCGGTTC GAGCGGACCC GGCCGGGCGG GCTGCCGCGG CGCCTGATCG GCGTCGTCGC CGACGTGACC GACCGCCACC TCTCGGAAGA GCGCCGCAGC CTCCTGATCC GCGAGCTGCA CCATCGGGTG AAGAACACGC TCGCCACGGT CCAGGCCATC GTCGGCTCGA CGGCGCGCAC CGCCACCAGC ATCGACAGCT TCCACGAGGC CTTCGTCGGC CGCATCAAGT CGCTCGCCCA CACTCACAGC GTGCTCACCG AGGCGACGTG GCAGACGGCG AGCCTGCGCG ATCTGCTCGC CTCCGAACTG ATGCCCTATG CCGAGAGCGA GACCGAGACC TCGCCGGATC TGCGCATCGT CCTCGACGGC CCGGCGGTGG ACCTGCCCTC CGAGATCGCC GTGCCGATCG GCATGGCGAT CCATGAATTG ACCACCAACG CCGCCAAGTA TGGTGCGCTA TCGACGGGGC GCGGACGGAT CACGATCACT TGGAGCGTCG AGGCCGGCGT GCTGCACCTC GATTGGCGCG AGAGCGGTGG CCCCCGCGTC ACCCCGCCGA CCCGCCAGGG CTTCGGCTCA CGCCTGCTCC AGCGGGTGCT GACCGCGCAG GTTCAGGCGC AGATCACCAC CGATTACGCG CCTGAAGGGT TCCACCTGAC GCTCGCCGCG CCCCTGCCCG CACGAAATCC GGCGCTCAAC CCCCTGGCGT GA
|
Protein sequence | MYDSADKGSR PADLSPALYR AAFDRAPVGL AVFSPDGRTI RTANPCLYRW LGYPSGFLDG RPIDQVIGRD AFDGETPGLK AGIRRWLRAD GSSLDLRLTL SGEDGGETVA VVNLVDADDL VRAEQNRDAL TAAGLGEWRW DLVTGQMVFS RRAAQILGYA PGRSVTWEGM RGQVDPDDAE RIQTAVAAAI AERRPYAFQT RFRRATDGAE IWIGARGEAL LAADGAPIGI VGVVQDVTTR VEAREALAER EERLRVATTV ADLGIFEWHV LDDRATWENE RMFAIFGRRP DEGSIGKSAF LKEILHPEDR PVFRQAILRA LRDDTILHAT GRIRRHDDGL WRTIDMAGRF ERTRPGGLPR RLIGVVADVT DRHLSEERRS LLIRELHHRV KNTLATVQAI VGSTARTATS IDSFHEAFVG RIKSLAHTHS VLTEATWQTA SLRDLLASEL MPYAESETET SPDLRIVLDG PAVDLPSEIA VPIGMAIHEL TTNAAKYGAL STGRGRITIT WSVEAGVLHL DWRESGGPRV TPPTRQGFGS RLLQRVLTAQ VQAQITTDYA PEGFHLTLAA PLPARNPALN PLA
|
| |