Gene Mext_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3297 
Symbol 
ID5835390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3654660 
End bp3656189 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content71% 
IMG OID641369097 
Productintegral membrane protein MviN 
Protein accessionYP_001640755 
Protein GI163852712 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCT CGATCCTCTC CGTCGGCGGC TGGACGCTGG TCTCGCGGGT CACCGGCTTT 
GCCCGCGACG TGGTCACGGC GGCCGTGATG GGCGCCGGGC CGATGGCGGA TGCCTTCGTC
GTCGCCTTCC GCCTGCCGAA CCACTTCCGC GCGATTTTCG GCGAGGGCGC ATTCAACACC
GCCTTCGTGC CGGCCTATAC CCATCTAGAA CAGGCGGGCG CCGAGGGCGT CGCCGCGCGC
TTCGCCGACC GCGTCTTCAC CCTGATGCTG ATCGTGCAGG TGGCTTTGCT CGCCCTCGCG
CTTCCGGCGA TGCCGTGGAT CGTGCGGGCG CTGGCACCGG GCTTCTCCGA GGACGGGGCG
CGCTTCGCGC TGGCCGTGAG CCTGACGCGG ATCACCTTCC CTTACCTGCT GTTCATGACG
CTGGTGACGC TGTTCTCCGG CATCCTCAAT GCGCATCGGC GCTTCGCCGC TGCGGCCGGC
GCGCCGGTGC TGCTCAACCT TTCGATGCTG GTGGCCCTCG CGCTGGCCTT CCTGTTCCCG
AACGCGGCCT ATGCCGCGGC CTGGGGCGTC TCGGTCTCGG GCGTTCTGCA ATTCGCGCTG
GTCTGGTGGG ATGCGCGCCG ACGCGCCTAC GCGCCGCGGC TGACGAAGCC GACCCTGCGC
GATCCCGACA TGACCCGGTT CTTCAAGATC CTGGGGCCCG CCGTGATCGG CTCGGCCGGC
TTCCAGATCG CAACCTTTGC CGACACCATC ATCGCGAGTT TCCTGCCGAC CGGTGCGGTT
TCGGCGCTGT ACTATGCCGA CCGGCTCTAC CAGTTGCCCT TCGGCGTCAT CGCCATCGCC
GCCGGCACGG TGCTCCTGCC CGAGATGAGC CGGCGCATCG CCGCGGGCGA CGTGGCCGGC
GCGCACGCGG CGCAGAACCG GGCCGCGGGC TTCTCGCTGG CGCTCTCGGC CCCCTTCACG
ATCGCCTTCC TGACGCTGCC GGGCCTGATC ATGGCGGCCC TGTTCCAACG CGGCGCCTTC
ACCGCCGAGG ACGCCGCCCG CGCGGCCTCC GTGCTCGCGG CCTACGGGTT GGCCCTGCCC
GCCGTGGTGA TGGTGCGCTC GGCCGTGGCG AGCTTCAACG CCCGGCAGGA CACGACGACG
CCGCTCTACG CCTCGCTCAC GGCGATCGCC GTCAACGTCG CGCTGAAGTT GGTGCTGACC
GGTCCCTACG GCGTCGCGGG TCTCGCCCTC GCCACCGCCA TCGCCCAGTG GATCAACCTC
GCTCTGCTCT ACGGGCTGGC GCTGCGCCGT GGCTGGACGG CGCCGGGGCG GGTGCTCGGG
GTCACCGTCG CCGCAGTCGT CGTGGCGAGC GCGGTGCTGG CGGTGCTCGC CGTCTACGGC
CTGCCCTTCG CCGAGCGGAT CGTGCCCGCC CTGCCCCATC TGCGCGAGAT CGCGGTGCTC
GCGCTCCTCG GCTTTGCCGG GGCGCTGGCT TACGCCGGCA CCCTGCTCGC GGTGATGGGC
GCGTTCGGCG TGCGATTGCG CCGCAGGTAG
 
Protein sequence
MIRSILSVGG WTLVSRVTGF ARDVVTAAVM GAGPMADAFV VAFRLPNHFR AIFGEGAFNT 
AFVPAYTHLE QAGAEGVAAR FADRVFTLML IVQVALLALA LPAMPWIVRA LAPGFSEDGA
RFALAVSLTR ITFPYLLFMT LVTLFSGILN AHRRFAAAAG APVLLNLSML VALALAFLFP
NAAYAAAWGV SVSGVLQFAL VWWDARRRAY APRLTKPTLR DPDMTRFFKI LGPAVIGSAG
FQIATFADTI IASFLPTGAV SALYYADRLY QLPFGVIAIA AGTVLLPEMS RRIAAGDVAG
AHAAQNRAAG FSLALSAPFT IAFLTLPGLI MAALFQRGAF TAEDAARAAS VLAAYGLALP
AVVMVRSAVA SFNARQDTTT PLYASLTAIA VNVALKLVLT GPYGVAGLAL ATAIAQWINL
ALLYGLALRR GWTAPGRVLG VTVAAVVVAS AVLAVLAVYG LPFAERIVPA LPHLREIAVL
ALLGFAGALA YAGTLLAVMG AFGVRLRRR