Gene Mext_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3287 
Symbol 
ID5835319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3645239 
End bp3646480 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content71% 
IMG OID641369087 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_001640745 
Protein GI163852702 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGC CGCCCCCCTC CGTCCGTGCG CTCCCGCGCC CTCTGCAACG CTCGTACTCG 
GCAACGCGCC GCTTTCTCAC GAACGAAGCG GCCGGCGGCA TCGTGCTCAT GGCCGCGGCC
GGCGCCGCGC TCGTGGTCGC CAATTCGCCC CTGGCGCAGG CCTATCACGA CCTCCTGCAC
ATCCATCTCG GGCCCTTGAG CCTGATGCAC TGGATCAACG ACGGCCTGAT GGTCGTGTTC
TTCCTGCTGG TCGGCCTCGA GATCAAGCGC GAGGGAATGG ACGGGCGCCT GCGCACCTGG
CCCGACCGGG TGCTGCCGGG GCTTGCTGCC GCGGCCGGCA TGGCCGTGCC GGCCCTGGTC
TACCTCGCCT TCAACGCCGG GCAGTCCACG GCTCGGGGCT GGGCGATCCC CGCCGCGACC
GACATCGCCT TCGCGCTGGG CGTCCTCGCG CTGCTGGGCT CGCGCGTGCC CGTTTCACTC
AAGATCTTCC TGTCGGCGGT GGCCATCGTC GACGATCTCG GCGCCGTGGT GATCATCGCG
CTGTTCTATA CGGGGCAACT CGATACCACG ATGCTGGCGG CCTCGGCCGG GATGCTCGCC
GTGCTGTTTG CCCTCAACCG CCTCGGTGTG CGTGCGCTCC TGCCCTATCT CCTCGCGGGC
CTCGTCCTCT GGGTGTTCGT CCTGCGCTCC GGCGTTCACG CCACGGTGGC CGGCGTGCTG
CTCGCCCTGT TCGTGCCGAT CCGCCCGAGC CCAGGCCGGC CGGAGGACGT GACTTCGCCC
CTGCACCGTC TGGAGCACGC CCTGACGCCC TGGGTCTCGT TCCTGATCGT GCCGATCTTC
GGCTTCGCCA ATGCCGGGGT GACGCTCCTC GGCTTGCCGG CGCGGGCGCT GATCGAGCCC
GTAACCCTCG GCGTCGCGCT CGGCCTGTTC ATCGGCAAGC AGGTCGGCAT CTTCGCGAGC
GTTCGGCTCG CCGCCGCCCT TGGCCTCGTT TCCCGCCCGG CGGGGGCGAC CTGGGTTCAA
GTCTACGGCG TCGCGCTCCT CTGCGGCATC GGCTTCACCA TGAGCCTGTT CATCGGCGCG
CTCGCCTTCA CGGATGGCCT GCACGAGACC GAGACCAAGC TCGGCGTCCT CGGCGGCTCG
CTGCTCTCGG CGCTGTTCGG TGCCGTGCTG CTCGCCCGGG CGACCGCGCG GGAGGCGAGC
CCGCGCCGGG GCCTTGGAGC CGAGCCCGAC CGCTTGCCTT GA
 
Protein sequence
MKPPPPSVRA LPRPLQRSYS ATRRFLTNEA AGGIVLMAAA GAALVVANSP LAQAYHDLLH 
IHLGPLSLMH WINDGLMVVF FLLVGLEIKR EGMDGRLRTW PDRVLPGLAA AAGMAVPALV
YLAFNAGQST ARGWAIPAAT DIAFALGVLA LLGSRVPVSL KIFLSAVAIV DDLGAVVIIA
LFYTGQLDTT MLAASAGMLA VLFALNRLGV RALLPYLLAG LVLWVFVLRS GVHATVAGVL
LALFVPIRPS PGRPEDVTSP LHRLEHALTP WVSFLIVPIF GFANAGVTLL GLPARALIEP
VTLGVALGLF IGKQVGIFAS VRLAAALGLV SRPAGATWVQ VYGVALLCGI GFTMSLFIGA
LAFTDGLHET ETKLGVLGGS LLSALFGAVL LARATAREAS PRRGLGAEPD RLP